Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | LPT19_RS05880 | Genome accession | NZ_CP099499 |
| Coordinates | 1220609..1220908 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain 0610-H-2A | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1215609..1225908
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPT19_RS05855 (LPT19_05855) | gcvPA | 1216821..1218167 (-) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| LPT19_RS05860 (LPT19_05860) | gcvT | 1218187..1219278 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| LPT19_RS05865 (LPT19_05865) | - | 1219437..1219961 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| LPT19_RS05870 (LPT19_05870) | - | 1219951..1220097 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| LPT19_RS05875 (LPT19_05875) | comGF | 1220194..1220691 (-) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| LPT19_RS05880 (LPT19_05880) | comGE | 1220609..1220908 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| LPT19_RS05885 (LPT19_05885) | comGD | 1220895..1221341 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| LPT19_RS05890 (LPT19_05890) | comGC | 1221319..1221630 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| LPT19_RS05895 (LPT19_05895) | comGB | 1221644..1222714 (-) | 1071 | WP_000776425.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| LPT19_RS05900 (LPT19_05900) | comGA | 1222686..1223660 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| LPT19_RS05905 (LPT19_05905) | - | 1223712..1224335 (-) | 624 | WP_229360418.1 | MBL fold metallo-hydrolase | - |
| LPT19_RS05910 (LPT19_05910) | - | 1224332..1224661 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| LPT19_RS05915 (LPT19_05915) | - | 1224661..1225647 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| LPT19_RS05920 (LPT19_05920) | - | 1225644..1225847 (-) | 204 | WP_000087559.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=700106 LPT19_RS05880 WP_000844413.1 1220609..1220908(-) (comGE) [Staphylococcus aureus strain 0610-H-2A]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=700106 LPT19_RS05880 WP_000844413.1 1220609..1220908(-) (comGE) [Staphylococcus aureus strain 0610-H-2A]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |