Detailed information NTG0697566

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: NDR85_RS13785
• Genome accession: NZ_CP098738
• Coordinates: 2723078..2725474 (-)
• Length: 798 a.a.
• NCBI ID: WP_044154310.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain XE48
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2718078..2730474

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDR85_RS13750 (NDR85_13720)	-	2719147..2719875 (+)	729	WP_044154318.1	amino acid ABC transporter ATP-binding protein	-
NDR85_RS13755 (NDR85_13725)	-	2719898..2720719 (+)	822	WP_044154315.1	transporter substrate-binding domain-containing protein	-
NDR85_RS13760 (NDR85_13730)	-	2720783..2721433 (+)	651	WP_044154313.1	amino acid ABC transporter permease	-
NDR85_RS13765 (NDR85_13735)	-	2721450..2722106 (+)	657	WP_044154312.1	amino acid ABC transporter permease	-
NDR85_RS13770 (NDR85_13740)	-	2722140..2722271 (-)	132	WP_024122308.1	YrzQ family protein	-
NDR85_RS13775 (NDR85_13745)	-	2722293..2722484 (-)	192	WP_010335110.1	hypothetical protein	-
NDR85_RS13780 (NDR85_13750)	-	2722496..2722960 (-)	465	WP_044154311.1	hypothetical protein	-
NDR85_RS13785 (NDR85_13755)	recD2	2723078..2725474 (-)	2397	WP_044154310.1	ATP-dependent RecD-like DNA helicase	Machinery gene
NDR85_RS13790 (NDR85_13760)	-	2725499..2726119 (-)	621	WP_404800614.1	tetratricopeptide repeat protein	-
NDR85_RS13795 (NDR85_13765)	mnmA	2726203..2727318 (-)	1116	WP_044154304.1	tRNA 2-thiouridine(34) synthase MnmA	-
NDR85_RS13800 (NDR85_13770)	-	2727347..2728489 (-)	1143	WP_263870685.1	cysteine desulfurase family protein	-
NDR85_RS13805 (NDR85_13775)	cymR	2728509..2728925 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
NDR85_RS13810 (NDR85_13780)	-	2729127..2730392 (+)	1266	WP_044154302.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 88981.56 Da
• Isoelectric Point: 4.9855

>NTDB_id=697566 NDR85_RS13785 WP_044154310.1 2723078..2725474(-) (recD2) [Bacillus halotolerans strain XE48]
MQQHPDQLKMEEEPFLKGTVNTVIYHNDANLYTVLKVKVTETSEAIEDKVVSVTGYFPALQEEETYTFYGKTVTHPKFGL
QFQAEHFKKEIPTTKEGVIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADSSVLYDVPRLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVRDVEGIGFGKADELGGRMGLSGNHPERIKAAILYTLETT
CLSEGHTYIETKQLIIETQTLLNQSAADGQRITEMDAANAMIALGENKDIVIEDERCYFPSLFFAEQNVAKRVKQIASQT
EYDDQFPESEFLLALGELEERMNVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGASLDPSDYKKD
EAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHEMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQILAPMYRGKAGINELNVMLQDILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSAQAAEMDAELAALQKELPFSVHDANIGMEGITPFDFMKEEQL

Nucleotide

• Length: 2397 bp

>NTDB_id=697566 NDR85_RS13785 WP_044154310.1 2723078..2725474(-) (recD2) [Bacillus halotolerans strain XE48]
GTGCAGCAGCACCCGGATCAGCTGAAAATGGAGGAGGAGCCCTTTTTAAAAGGGACAGTAAACACCGTCATTTATCACAA
TGACGCCAATTTATATACGGTTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCTATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAAACCGTTACTCACCCAAAGTTCGGACTG
CAATTTCAAGCTGAGCATTTCAAAAAGGAGATCCCGACAACAAAAGAAGGCGTCATTCAGTATTTGTCGAGCGATCTGTT
TGAAGGAATCGGTAAAAAAACCGCTGAAGAGATTGTGAAAAAACTGGGTGACAGTGCGATTAATAAAATTTTGGCTGATT
CTTCAGTCCTTTATGATGTTCCGAGACTGTCAAAAAAGAAAGCTGACACCCTTGCCGGTGCTTTGCAGCGGCATCAGGGA
CTGGAGCAAATTATGATTTCGCTGAATCAATTTGGGTTCGGCCCTCAGCTGTCTATGAAAATCTATCAGGCCTATGAATC
CGAGACGCTGGAGAAAATTCAGGAAAACCCTTATCAGCTTGTGAGAGACGTGGAAGGCATAGGCTTTGGAAAAGCAGATG
AGCTTGGCGGAAGAATGGGGCTCTCAGGGAATCATCCTGAGCGGATAAAAGCGGCTATTTTGTACACGCTTGAAACGACA
TGCCTTTCAGAAGGGCATACGTACATAGAAACGAAGCAGCTGATTATCGAAACCCAAACGCTGTTAAATCAGTCAGCGGC
AGATGGACAGCGCATTACAGAAATGGATGCCGCTAATGCAATGATTGCGCTTGGAGAAAATAAGGATATTGTCATTGAAG
ATGAACGATGTTACTTTCCGTCGCTGTTTTTCGCTGAACAAAATGTTGCAAAGCGTGTGAAACAGATCGCAAGCCAAACC
GAATATGACGATCAGTTTCCTGAATCAGAATTCCTTCTGGCTTTAGGAGAATTGGAAGAGCGTATGAATGTTCAGTACGC
GCCGAGTCAGAAGGAAGCGATACAAAAAGCGCTGTCGTCGCCGATGCTTCTTTTAACGGGAGGGCCGGGTACCGGTAAAA
CAACGGTCATCAGAGGCATTGTAGAATTGTATGGAGAACTCCACGGTGCTTCGCTTGATCCGTCGGATTATAAAAAAGAT
GAAGCCTTTCCGATTGTGCTGGCCGCGCCTACAGGTAGAGCGGCGAAACGAATGAGTGAGTCAACGGGTCTTCCGGCGGT
TACGATACACCGGCTGCTCGGCTGGAATGGCGCGGAAGGATTTACTCATACAGAGGATCAGCCGATTGAAGGAAAGCTTT
TGATTATCGATGAAGCGAGTATGCTTGATATATGGCTTGCGAATCATTTGTTCAAAGCGATCCCTGACCATATTCAAATC
ATCATTGTCGGAGACGAAGACCAGCTGCCTTCCGTCGGACCCGGTCAAGTGCTCAGAGACCTTTTGGCATCCCAGGTGAT
TCCGACCGTAAGACTGACAGACATCTACCGGCAAGCGGAAGGATCGTCGATTGTCGAGCTTGCCCACGAGATGAAAAATG
GGCTGCTTCCAAACAACCTGACGGCCCCGACAAAGGATCGTTCCTTTATTCGCTGCGGTGGTTCGCAAATTAAAGAAGTG
GTTGAGAAGGTTGTCGCGAATGCATTGAAAAAAGGATATACGGCAAAAGATATACAGATCCTCGCCCCAATGTACAGAGG
GAAAGCCGGAATCAATGAGCTGAATGTGATGCTGCAGGATATTTTAAACCCTCCAAAAGAAAAGCGGAGGGAAATTAAGT
TCGGTGACGTTGTCTATAGAACCGGGGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAAACAATGTGTTTAACGGCGAT
ATTGGAGAAATCACTTCAATTTTCTATGCGAAGGAAAATACAGAAAAAGAAGACATGGCTGTTGTCTCTTTTGACGGCAA
TGAAATGACATTTACGAAAAAAGACTTCAGTCAGTTTACTCATGCGTATTGCTGCTCTATTCATAAATCGCAGGGCAGTG
AATTTCCGATCGTGGTTCTTCCTGTAGTGAAGGGCTACTATAGAATGCTCAGAAGAAACCTTCTATATACCGCCATCACG
AGGGCGAAGAAATTTCTCATTTTATGCGGGGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAATGACGCGACTGTCAG
ACAGACCTCATTAAAAAACAGGCTGTCAGCGCAGGCGGCTGAAATGGATGCTGAGCTTGCGGCTTTGCAAAAAGAGCTCC
CGTTCAGCGTGCACGACGCAAATATCGGAATGGAAGGCATTACGCCATTCGATTTTATGAAAGAAGAACAGCTGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• AAA domain (AAA_30) (346-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	95.985	99.875	0.959