Detailed information NTG0069505

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: BVS141_RS08410
• Genome accession: NZ_AP018402
• Coordinates: 1650381..1651160 (+)
• Length: 259 a.a.
• NCBI ID: WP_003154263.1
• Uniprot ID: I2C545
• Organism: Bacillus velezensis strain S141
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1645381..1656160

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BVS141_RS08390 (BVS141_16650)	trmFO	1646068..1647375 (+)	1308	WP_012117550.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
BVS141_RS08395 (BVS141_16660)	xerC	1647445..1648362 (+)	918	WP_007409774.1	tyrosine recombinase XerC	-
BVS141_RS08400 (BVS141_16670)	hslV	1648378..1648923 (+)	546	WP_003154267.1	ATP-dependent protease subunit HslV	-
BVS141_RS08405 (BVS141_16680)	hslU	1648940..1650343 (+)	1404	WP_007611413.1	HslU--HslV peptidase ATPase subunit	-
BVS141_RS08410 (BVS141_16690)	codY	1650381..1651160 (+)	780	WP_003154263.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
BVS141_RS08415 (BVS141_16700)	flgB	1651514..1651903 (+)	390	WP_060561695.1	flagellar basal body rod protein FlgB	-
BVS141_RS08420 (BVS141_16710)	flgC	1651903..1652355 (+)	453	WP_015239851.1	flagellar basal body rod protein FlgC	-
BVS141_RS08425 (BVS141_16720)	fliE	1652366..1652686 (+)	321	WP_007409777.1	flagellar hook-basal body complex protein FliE	-
BVS141_RS08430 (BVS141_16730)	fliF	1652729..1654339 (+)	1611	WP_012117551.1	flagellar basal-body MS-ring/collar protein FliF	-
BVS141_RS08435 (BVS141_16740)	fliG	1654352..1655368 (+)	1017	WP_003154256.1	flagellar motor switch protein FliG	-
BVS141_RS08440 (BVS141_16750)	fliH	1655361..1656116 (+)	756	WP_060561694.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29056.24 Da
• Isoelectric Point: 4.6017

>NTDB_id=69505 BVS141_RS08410 WP_003154263.1 1650381..1651160(+) (codY) [Bacillus velezensis strain S141]
MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTRNLF
NVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQDQFEDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=69505 BVS141_RS08410 WP_003154263.1 1650381..1651160(+) (codY) [Bacillus velezensis strain S141]
ATGGCTTTACTACAAAAAACACGAATTATTAACAGTATGCTGCAGGCTGCGGCAGGCAAACCCGTAAACTTTAAAGAAAT
GGCTGAAACGCTTCGTGACGTCATTGATTCTAATATTTTCGTCGTCAGCCGCAGAGGAAAGCTTTTGGGCTACTCTATTA
ATCAGCAGATTGAAAATGACCGCATGAAAAAAATGCTTGAAGACCGCCAGTTCCCGGAAGAGTACACGAGAAATCTGTTC
AATGTTCCGGAGACGTCTTCAAACCTTGATATCAACAGCGAATACACGGCGTTTCCTGTGGAAAACAGAGACCTGTTCCA
AGCGGGCTTAACAACGATCGTGCCGATCATCGGCGGAGGAGAGAGACTGGGCACGCTCATTCTGTCCCGTCTGCAGGATC
AATTTGAAGATGATGATCTCATTCTTGCTGAATACGGAGCAACCGTTGTAGGAATGGAGATTTTAAGAGAAAAAGCGGAA
GAAATCGAAGAAGAGGCACGAAGCAAAGCGGTTGTTCAAATGGCGATCAGTTCTCTGTCTTACAGTGAACTTGAAGCGAT
TGAGCATATCTTTGAAGAGCTTGACGGAAACGAAGGCTTGCTTGTGGCAAGTAAGATTGCGGATCGTGTCGGCATTACGC
GTTCAGTAATCGTTAACGCGCTGAGAAAGCTGGAAAGCGCAGGCGTCATTGAATCCAGATCACTGGGAATGAAGGGAACG
TACATTAAAGTTCTGAACAACAAATTCCTTATTGAATTGGAAAACCTTAAATCTCATTAA

Domains

Predicted by InterproScan.

• CodY GAF-like domain (CodY) (3-178)

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

3D structure

• AlphaFold DB: I2C545

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	99.228	100	0.992
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.843	98.456	0.471