Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | NB629_RS13235 | Genome accession | NZ_CP098253 |
| Coordinates | 2708864..2709163 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain M0 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2703864..2714163
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NB629_RS13195 (NB629_13195) | - | 2703925..2704128 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| NB629_RS13200 (NB629_13200) | - | 2704125..2705111 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| NB629_RS13205 (NB629_13205) | - | 2705111..2705440 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| NB629_RS13210 (NB629_13210) | - | 2705437..2706060 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| NB629_RS13215 (NB629_13215) | comGA | 2706112..2707086 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NB629_RS13220 (NB629_13220) | comGB | 2707058..2708128 (+) | 1071 | WP_000776412.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| NB629_RS13225 (NB629_13225) | comGC | 2708142..2708453 (+) | 312 | WP_000472257.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NB629_RS13230 (NB629_13230) | comGD | 2708431..2708877 (+) | 447 | WP_001791207.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| NB629_RS13235 (NB629_13235) | comGE | 2708864..2709163 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| NB629_RS13240 (NB629_13240) | comGF | 2709081..2709578 (+) | 498 | WP_001794328.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| NB629_RS13245 (NB629_13245) | - | 2709675..2709821 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| NB629_RS13250 (NB629_13250) | - | 2709811..2710335 (+) | 525 | WP_001015125.1 | shikimate kinase | - |
| NB629_RS13255 (NB629_13255) | gcvT | 2710494..2711585 (+) | 1092 | WP_000093347.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| NB629_RS13260 (NB629_13260) | gcvPA | 2711605..2712951 (+) | 1347 | WP_000019697.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=694782 NB629_RS13235 WP_000844413.1 2708864..2709163(+) (comGE) [Staphylococcus aureus strain M0]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=694782 NB629_RS13235 WP_000844413.1 2708864..2709163(+) (comGE) [Staphylococcus aureus strain M0]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |