Detailed information NTG0689270

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: M5E03_RS12480
• Genome accession: NZ_CP097374
• Coordinates: 2412407..2414791 (-)
• Length: 794 a.a.
• NCBI ID: WP_024423121.1
• Uniprot ID: -
• Organism: Bacillus safensis strain AHB11
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2407407..2419791

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M5E03_RS12445 (M5E03_12445)	-	2408371..2409099 (+)	729	WP_024423116.1	amino acid ABC transporter ATP-binding protein	-
M5E03_RS12450 (M5E03_12450)	-	2409113..2409922 (+)	810	WP_126681537.1	transporter substrate-binding domain-containing protein	-
M5E03_RS12455 (M5E03_12455)	-	2410000..2410653 (+)	654	WP_024427868.1	amino acid ABC transporter permease	-
M5E03_RS12460 (M5E03_12460)	-	2410669..2411319 (+)	651	WP_024427867.1	amino acid ABC transporter permease	-
M5E03_RS12465 (M5E03_12465)	-	2411421..2411552 (-)	132	WP_003216198.1	YrzQ family protein	-
M5E03_RS12470 (M5E03_12470)	-	2411573..2411764 (-)	192	WP_003216308.1	hypothetical protein	-
M5E03_RS12475 (M5E03_12475)	-	2411778..2412296 (-)	519	WP_149126432.1	PRC-barrel domain-containing protein	-
M5E03_RS12480 (M5E03_12480)	recD2	2412407..2414791 (-)	2385	WP_024423121.1	ATP-dependent RecD-like DNA helicase	Machinery gene
M5E03_RS12485 (M5E03_12485)	-	2414811..2415464 (-)	654	WP_025092425.1	tetratricopeptide repeat protein	-
M5E03_RS12490 (M5E03_12490)	mnmA	2415524..2416642 (-)	1119	WP_024423123.1	tRNA 2-thiouridine(34) synthase MnmA	-
M5E03_RS12495 (M5E03_12495)	-	2416737..2417879 (-)	1143	WP_041086402.1	cysteine desulfurase family protein	-
M5E03_RS12500 (M5E03_12500)	cymR	2417898..2418317 (-)	420	WP_024423125.1	cysteine metabolism transcriptional regulator CymR	-
M5E03_RS12505 (M5E03_12505)	-	2418526..2419791 (+)	1266	WP_025092426.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89073.59 Da
• Isoelectric Point: 5.2068

>NTDB_id=689270 M5E03_RS12480 WP_024423121.1 2412407..2414791(-) (recD2) [Bacillus safensis strain AHB11]
MQEHPDQMKLEDEPFLKGTIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGNQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQIMDAELEALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=689270 M5E03_RS12480 WP_024423121.1 2412407..2414791(-) (recD2) [Bacillus safensis strain AHB11]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCCGCACTTCATGAGGAGGAAACCTACACCTTTTATGGCAAAGTGACAAGCCATCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTACCGACAACGAAGCAAGGAATCATACATTATCTCTCAAGTGATTTATT
TGAGGGGATAGGAAAAAAGACGGCGGAAGAAATTGTGGGACAGCTTGGCAATCAGACGCTTCATAAGATTATGCGTGACC
CAGCTGTTTTGTATGATGTACCGCGCTTATCAAAAAAGAAGGCGGATAAGCTGGCCGCAGCGCTTCAGGAGCATCAAGGG
CTGGAACAAATCATGATCAGCCTGAATCAGTATGGCTTTGGTCCGCAGCTCAGCATGAAGATTTACCAAGTATACGAGAG
TGAAACGCTGCAGAAAATCGAGGAAAATCCCTATCAGCTCGTTAAGGATGTTGAGGGGATCGGATTTATTAAGGCGGATG
AGCTTGGCGCTAGAACAGGCATCTCAGGAAATGACCCAGAACGGATTCGCGCCGCCTTGCTATATACAGTGGAGACAGCC
AGTCTACAAGACGGTCATACGTACATACAAACGAAAGATTTGATCGTCGAAACCCGCAAGCTGCTCAACCAAACAGGCAA
TGATTACAAAGTGACTGAAATGGATGTTGCCAATCAGATCATTGCACTTGGCGAAGGAAAAGAAATGATCATTGAAGATG
ACCGCTGCTATCATCCATCCTTATTTTATGCGGAGCAAAGTGTCGCCAAACGCATTCAAAAAATCGTCTCCCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTCCTGCTGGCACTTGGCGAGTTGGAGGAGCGGTTAGGCGTCCAATATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCGATGCTGCTTTTAACAGGCGGGCCTGGAACAGGGAAGACGA
CGGTCATTAAAGGAATTGTCGAGCTTTACAGTGATCTTCACGGTGTTTCTCTTGATCCGAGTGATTATAAAAAAGATGAA
TCCTTCCCATTTGTGCTTGCGGCACCAACTGGACGGGCGGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTGAC
CATTCACCGGCTGCTAGGCTGGAATGGTTCGGAGGGCTTCTCTCATGATGAGGAACAGCCGATTGAAGGAAAGCTTGTCA
TTATTGATGAATCAAGTATGCTGGATATTTGGCTGGCGAATCATTTATTTAAAGCGATTCCTGATCATATCCAAGTGATT
ATGGTAGGGGATGAACATCAGCTGCCATCTGTCGGACCAGGCCAAGTTTTACGGGATTTGCTTGCCTCAAAAGCCGTGCC
GGCTGTTACCCTGACAGATATTTACCGGCAGGCAGACGGCTCAACCATTGTTGAACTTGCACATGATATGAAAAATGGTG
TGCTGCCAAAGGATATCACTGCACGCTCAAAGGATCGGTCCTTCATTCAGTGTTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTTGTCAGCAATGCTGCTCAAAAAGGGTTTTCGGCAAAGGATATTCAAGTGCTGGCACCGATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAACAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAGGGCAGGGAAATCCCGTTTG
GTGATGTGGTGTACCGGACAGGTGATAAGGTGCTTCAGCTTGTGAATCAGCCGGAGAACAACATTTTTAACGGCGATATC
GGTGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAAGACATGGCTGTGATCTCTTTTGATGGAAATGA
AATCACCTTTACAAAAAAAGATTTTCATCAATTTACACATGCTTATTGCTGCTCCATTCACAAATCACAAGGAAGTGAAT
TCCCGATTGTTGTGCTGCCAGTCGTGAGGAGCTACTACCGAATGCTTCGGCGGAATCTACTGTACACAGCCATTACACGC
AGTAAAAAGTTTTTAATACTGTGCGGCGAGGAATCAGCGCTGGAGTGGGGTGTGAAAAACAATGAGGATTCCCTTAGACA
AACGTCCTTAACGATGCGGCTAGTGCAAACCGAACAAATCATGGATGCAGAACTTGAAGCGCTCCAAAAAGAGCTTCCGT
TTAGCGTACATGACGCAAATATTGGCATGGAGGGAATCACTCCATTTGATTTTATGCATGAGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.648	100	0.798