Detailed information NTG0689210

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: M5E02_RS12310
• Genome accession: NZ_CP097373
• Coordinates: 2400568..2402952 (-)
• Length: 794 a.a.
• NCBI ID: WP_249856321.1
• Uniprot ID: -
• Organism: Bacillus safensis strain AHB2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2395568..2407952

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M5E02_RS12275 (M5E02_12275)	-	2396553..2397281 (+)	729	WP_048238982.1	amino acid ABC transporter ATP-binding protein	-
M5E02_RS12280 (M5E02_12280)	-	2397295..2398104 (+)	810	WP_252056371.1	transporter substrate-binding domain-containing protein	-
M5E02_RS12285 (M5E02_12285)	-	2398182..2398835 (+)	654	WP_252056372.1	amino acid ABC transporter permease	-
M5E02_RS12290 (M5E02_12290)	-	2398851..2399501 (+)	651	WP_252056373.1	amino acid ABC transporter permease	-
M5E02_RS12295 (M5E02_12295)	-	2399581..2399712 (-)	132	WP_003216198.1	YrzQ family protein	-
M5E02_RS12300 (M5E02_12300)	-	2399733..2399924 (-)	192	WP_003216308.1	hypothetical protein	-
M5E02_RS12305 (M5E02_12305)	-	2399938..2400456 (-)	519	WP_252056374.1	prc-barrel domain-containing protein	-
M5E02_RS12310 (M5E02_12310)	recD2	2400568..2402952 (-)	2385	WP_249856321.1	ATP-dependent RecD-like DNA helicase	Machinery gene
M5E02_RS12315 (M5E02_12315)	-	2402972..2403625 (-)	654	WP_025092425.1	tetratricopeptide repeat protein	-
M5E02_RS12320 (M5E02_12320)	mnmA	2403686..2404804 (-)	1119	WP_252056375.1	tRNA 2-thiouridine(34) synthase MnmA	-
M5E02_RS12325 (M5E02_12325)	-	2404899..2406041 (-)	1143	WP_252056376.1	cysteine desulfurase family protein	-
M5E02_RS12330 (M5E02_12330)	-	2406060..2406479 (-)	420	WP_024423125.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89087.62 Da
• Isoelectric Point: 5.2082

>NTDB_id=689210 M5E02_RS12310 WP_249856321.1 2400568..2402952(-) (recD2) [Bacillus safensis strain AHB2]
MQEHPDQMKLEDEPFLKGTIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGNQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDERCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQIMDAELEALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=689210 M5E02_RS12310 WP_249856321.1 2400568..2402952(-) (recD2) [Bacillus safensis strain AHB2]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTAAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAGGAAACCTACACCTTCTATGGCAAAGTCACAAGTCATCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTGCCAACAACGAAGCAAGGAATCATTCATTATCTCTCAAGTGATTTATT
TGAGGGGATAGGGAAAAAGACGGCTGAAGAAATCGTGGGGCAGCTTGGCAATCAGACGCTTCATAAAATTATGCGTGACC
CAGCTGTTTTGTATGATGTTCCGCGCCTATCAAAAAAGAAGGCGGATAAGCTGGCCGCAGCGCTTCAGGAGCATCAAGGG
CTGGAACAAATCATGATCAGCTTGAATCAATATGGCTTTGGTCCGCAGCTCAGCATGAAGATTTACCAAGTGTACGAAAG
TGAAACGCTGCAGAAAATCGAGGAAAATCCCTATCAACTCGTTAAGGATGTCGAGGGAATCGGATTTATTAAGGCGGATG
AGCTAGGCGCTAGAACAGGCATCTCTGGAAATGACCCAGAGCGGATTCGTGCCGCCTTGCTATATACAGTGGAGACAGCT
AGTCTTCAGGACGGTCATACGTACATACAAACGAAAGATTTGATCGTCGAAACCCGCAAACTGCTCAACCAAACAGGCAA
TGATTACAAAGTGACTGAAATGGATGTCGCCAATCAGATCATTGCACTTGGTGAAGGAAAAGAAATGATCATTGAAGATG
AGCGCTGCTATCATCCATCCTTATTTTATGCGGAGCAAAGTGTCGCCAAACGCATTCAAAAAATCGTCTCCCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTGCTTGCACTTGGGGAGCTGGAGGAGCGGTTAGGCGTTCAGTATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCGATGCTGCTTTTAACAGGCGGCCCTGGAACAGGGAAGACAA
CAGTCATTAAAGGGATTGTCGAGCTTTACAGTGATCTTCACGGTGTATCTCTTGATCCGAGTGATTATAAAAAAGATGAA
TCCTTCCCATTTGTACTTGCGGCACCAACTGGACGGGCGGCTAAACGGATGACAGAATCAACAGGGCTTCCGGCTGTCAC
CATTCACCGGCTGCTAGGCTGGAACGGTTCGGAGGGCTTCTCGCATGATGAGGAACAGCCAATTGAAGGGAAGCTTGTCA
TCATTGATGAATCAAGTATGCTGGATATTTGGCTGGCGAATCATTTGTTTAAAGCGATTCCTGATCATATTCAAGTGATT
ATGGTAGGGGATGAACATCAGCTGCCATCTGTCGGACCAGGCCAAGTTTTACGGGATTTGCTTGCCTCAAAAGCTGTGCC
GGCTGTTACCTTGACAGATATTTATAGGCAGGCAGACGGCTCAACCATTGTTGAACTTGCACATGATATGAAAAATGGTG
TGCTGCCAAAGGATATTACTGCACGCTCAAAGGATCGGTCGTTCATTCAGTGTTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTCGTCAGCAATGCTGCTCAAAAAGGGTTTTCGGCAAAGGACATTCAAGTGCTGGCACCGATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAACAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAAGGCAGAGAAATCCCGTTTG
GTGATGTGGTGTACCGGACAGGTGATAAAGTGCTTCAGCTTGTGAATCAGCCGGAGAATAACATTTTTAACGGCGATATC
GGTGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAGGACATGGCCGTCATCTCCTTTGATGGAAATGA
AATCACCTTTACAAAAAAGGATTTTCATCAATTTACACATGCGTACTGCTGCTCCATTCACAAATCACAAGGAAGTGAAT
TCCCAATTGTTGTGCTGCCAGTCGTGAGAAGCTATTACCGAATGCTTCGGCGGAATCTGCTGTACACAGCCATTACACGA
AGTAAAAAGTTTTTAATTTTGTGCGGCGAGGAATCAGCGCTGGAGTGGGGCGTGAAAAACAATGAGGATTCCCTCAGACA
AACGTCCTTAACGATGCGGCTCGTGCAAACCGAACAAATCATGGATGCAGAGCTCGAAGCGCTCCAAAAAGAGCTTCCGT
TTAGCGTACATGACGCAAATATTGGCATGGAGGGAATCACTCCGTTTGATTTTATGCATGAGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.648	100	0.798