Detailed information NTG0687483

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: M1R55_RS06540
• Genome accession: NZ_CP097149
• Coordinates: 1343697..1344794 (-)
• Length: 365 a.a.
• NCBI ID: WP_249393879.1
• Uniprot ID: -
• Organism: Deinococcus sp. QL22
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1338697..1349794

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M1R55_RS06515 (M1R55_06515)	dnaN	1338721..1339803 (-)	1083	WP_249393875.1	DNA polymerase III subunit beta	-
M1R55_RS06520 (M1R55_06520)	dnaA	1340208..1341578 (-)	1371	WP_249394154.1	chromosomal replication initiator protein DnaA	-
M1R55_RS06525 (M1R55_06525)	-	1341798..1342214 (-)	417	WP_249393876.1	DUF4397 domain-containing protein	-
M1R55_RS06530 (M1R55_06530)	-	1342370..1343359 (-)	990	WP_249393877.1	NAD-dependent epimerase/dehydratase family protein	-
M1R55_RS06535 (M1R55_06535)	-	1343394..1343681 (+)	288	WP_249393878.1	hypothetical protein	-
M1R55_RS06540 (M1R55_06540)	dprA	1343697..1344794 (-)	1098	WP_249393879.1	DNA-processing protein DprA	Machinery gene
M1R55_RS06545 (M1R55_06545)	-	1344977..1345729 (+)	753	WP_249393880.1	metallophosphoesterase	-
M1R55_RS06550 (M1R55_06550)	-	1345806..1346774 (+)	969	WP_249393881.1	DNA polymerase III	-
M1R55_RS06555 (M1R55_06555)	-	1346826..1347488 (+)	663	WP_249393882.1	MBL fold metallo-hydrolase	-
M1R55_RS06560 (M1R55_06560)	-	1347619..1348578 (+)	960	WP_249393883.1	glycosidase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 37921.37 Da
• Isoelectric Point: 6.6987

>NTDB_id=687483 M1R55_RS06540 WP_249393879.1 1343697..1344794(-) (dprA) [Deinococcus sp. QL22]
MTSGSNSSATSQQAEELLALLTLRFTPQLGSRRIENLCQRFGSAWAALNAPLTELRHTPGLDAKSLAGIGTAKPAQQAEA
ELGKLEREGVTLLGRGLPGYPAALDSLGDPPAVLWVLGPLPDLPTVPRAVGVVGTRAASPHALALTRKIAADLARSDVTV
ISGLARGIDTAAHSASTEAGGLSIGILGSAVNMIYPHENTALAQKLTLISEYPLGTGPATHHFPIRNRLIAALSAATLVV
EGEWKSGSLITATHALECGRTVFAVPGLAGDPRAAGPHRLIRDGAVLTENVQDILNEMGWGQARTAPLPDLPPDQARVLA
ALNAPSTLDSLQASTGLGLSELQTALVMLQLQGMAEEVGGRWVRR

Nucleotide

• Length: 1098 bp

>NTDB_id=687483 M1R55_RS06540 WP_249393879.1 1343697..1344794(-) (dprA) [Deinococcus sp. QL22]
GTGACATCCGGTTCCAATTCCTCTGCGACCTCCCAACAAGCCGAAGAACTGCTGGCCCTGCTGACACTCCGGTTTACGCC
GCAGTTGGGATCACGCCGCATAGAAAACCTGTGCCAACGCTTTGGCAGTGCGTGGGCCGCCCTGAACGCGCCCCTGACGG
AACTGCGCCACACACCGGGACTGGATGCCAAATCGCTGGCAGGCATAGGAACCGCCAAACCCGCGCAACAGGCCGAAGCC
GAACTGGGGAAACTGGAGCGCGAAGGCGTGACCCTGCTGGGCCGGGGCTTGCCGGGCTATCCGGCAGCGTTGGATTCGCT
GGGCGACCCGCCCGCCGTACTGTGGGTGCTGGGGCCGCTGCCCGACTTGCCCACCGTGCCGCGTGCGGTTGGTGTGGTGG
GAACCCGCGCCGCCAGCCCGCATGCATTGGCCCTGACCCGCAAAATCGCCGCCGATCTGGCCCGCTCCGATGTGACCGTG
ATTAGTGGCCTGGCACGCGGTATAGACACCGCCGCCCACAGTGCCAGCACCGAGGCGGGTGGCCTGAGCATCGGCATTCT
GGGCAGCGCCGTGAACATGATCTATCCACACGAAAACACTGCGCTGGCCCAAAAGCTGACACTGATTTCCGAATATCCGC
TGGGCACCGGGCCAGCCACGCACCACTTCCCCATCAGAAACAGGCTGATCGCGGCGCTGAGTGCGGCCACATTAGTGGTA
GAAGGCGAGTGGAAATCGGGTTCCCTGATTACGGCCACACACGCGCTGGAATGTGGCCGCACTGTGTTTGCTGTACCCGG
ACTGGCAGGCGATCCCCGCGCCGCTGGCCCCCACCGCCTGATCCGTGACGGAGCCGTGCTGACCGAAAACGTGCAGGACA
TCCTGAACGAGATGGGCTGGGGACAGGCCCGCACCGCGCCGCTGCCCGACCTGCCGCCCGATCAAGCACGCGTGCTGGCC
GCGCTAAACGCCCCTTCTACCTTAGACAGCTTGCAAGCCAGCACAGGCCTGGGCCTCTCGGAACTGCAAACCGCGCTGGT
GATGCTGCAACTGCAGGGGATGGCCGAGGAAGTGGGGGGACGCTGGGTGCGGCGGTAG

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (303-360)

• DNA recombination-mediator protein A (DNA_processg_A) (85-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	69.231	96.164	0.666