Detailed information NTG0686922

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: M2901_RS01610
• Genome accession: NZ_CP097072
• Coordinates: 320947..323385 (-)
• Length: 812 a.a.
• NCBI ID: WP_248855953.1
• Uniprot ID: -
• Organism: Vagococcus lutrae strain AT03
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 315947..328385

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M2901_RS01590 (M2901_01590)	-	317039..318325 (-)	1287	WP_126760643.1	YeeE/YedE family protein	-
M2901_RS01595 (M2901_01595)	-	318511..319395 (+)	885	WP_248855950.1	LysR family transcriptional regulator	-
M2901_RS01600 (M2901_01600)	-	319468..320418 (+)	951	WP_248855951.1	diacylglycerol kinase family protein	-
M2901_RS01605 (M2901_01605)	-	320448..320900 (-)	453	WP_248855952.1	hypothetical protein	-
M2901_RS01610 (M2901_01610)	recD2	320947..323385 (-)	2439	WP_248855953.1	ATP-dependent RecD-like DNA helicase	Machinery gene
M2901_RS01615 (M2901_01615)	-	323400..324449 (-)	1050	WP_248855954.1	SepM family pheromone-processing serine protease	-
M2901_RS01620 (M2901_01620)	coaD	324465..324968 (-)	504	WP_248855955.1	pantetheine-phosphate adenylyltransferase	-
M2901_RS01625 (M2901_01625)	rsmD	324965..325525 (-)	561	WP_222318670.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
M2901_RS01630 (M2901_01630)	-	325613..325897 (-)	285	WP_248855956.1	YlbG family protein	-
M2901_RS01635 (M2901_01635)	-	325890..326318 (-)	429	WP_023606468.1	YlbF family regulator	-
M2901_RS01640 (M2901_01640)	-	326320..327456 (-)	1137	WP_248855957.1	CAP-associated domain-containing protein	-

Sequence

Protein

• Length: 812 a.a.
• Molecular weight: 91334.08 Da
• Isoelectric Point: 4.5107

>NTDB_id=686922 M2901_RS01610 WP_248855953.1 320947..323385(-) (recD2) [Vagococcus lutrae strain AT03]
MVESEKDLHHTPKIIGRIQAIFYQNPTNFYKVMLIEVEESEPSIDELEMVVTGNFGDMMEGESYQFSGQFVTHPKYGRQF
QVERYEQVKPTSANGLIDYLSGVNFPGIGKKTAEKLVDYFGEETIDVIMNDSERLDALDFLNEKRRDTIISGVKSNYGSE
KILIQLNEWGFGSQLAMTIFQKYQEQTLTLLEENPYRLIEDIEGIAFKKADKLAEHLNIAANAPERFQAAILTELLSYSL
SEGHTYIEAQVLLEKVVTLLESSRRYPVELSDVADQIIALIDLGKMQQEGTKLFHNSLFYAEWGVSHAIHRLLKRKQSID
YDEATILASIKQMETELGIAYGPSQKTALIEGVQSSFFILTGGPGTGKTTVINGLVRLFSELNELSLDINDYHNEVFPIL
LAAPTGRAAKRMSETTGLPAKTIHRLLGLTGQEMHPEEIANELEGSLLILDEMSMVDTWLANALFKAIPTNMQVIIVGDK
DQLPSVGPGQVLHDLLSIPMLPQCELTDIYRQEDGSSIIALAHAIKEGTLPTDFTRNQKDRSFIAGNTYQIEEMIRQIVV
KAAEKGFTASDIQVLAPMYRGPAGIDRLNKMLQEVLNPNESGRRKEVTWFETVYRIGDKVLQLVNVPENQVYNGDIGEIT
GIILAKEHEDKVDVLVVDFDGIEVEYPRNQWQQLTLAYCCSIHKSQGSEYPLVILPMVNGYYRMLQRNLLYTAITRSQER
LILLGELEAYETAVKHEGANRQTALKERIMAETFPSTTSLDTQSQEESIPKEEIAQEQLETQASFILTKELILSGAVDPM
IGMEGITPFDYI

Nucleotide

• Length: 2439 bp

>NTDB_id=686922 M2901_RS01610 WP_248855953.1 320947..323385(-) (recD2) [Vagococcus lutrae strain AT03]
ATGGTAGAAAGTGAAAAAGATTTACATCATACGCCTAAAATAATAGGACGGATTCAAGCCATCTTTTATCAAAATCCTAC
TAATTTTTATAAAGTGATGTTGATTGAAGTGGAAGAAAGCGAGCCGTCAATTGATGAATTAGAAATGGTTGTAACAGGAA
ATTTTGGCGATATGATGGAAGGAGAAAGCTACCAGTTTTCTGGACAGTTTGTCACACATCCTAAGTATGGCCGTCAATTC
CAAGTGGAACGTTATGAACAGGTAAAACCAACCAGTGCTAATGGTTTAATTGACTATTTATCTGGGGTTAACTTTCCCGG
AATTGGAAAAAAAACAGCTGAAAAATTAGTAGATTATTTTGGCGAAGAAACAATCGATGTCATTATGAATGATTCTGAAA
GATTAGACGCGTTAGATTTTTTAAATGAAAAACGAAGAGATACGATTATATCGGGAGTTAAAAGTAATTACGGGTCAGAA
AAAATCCTTATTCAACTGAATGAATGGGGATTTGGTAGTCAATTAGCCATGACTATCTTTCAAAAGTATCAGGAACAAAC
ATTAACCCTCTTAGAAGAGAATCCTTATCGCTTGATTGAAGATATTGAAGGGATTGCGTTTAAAAAAGCTGATAAGTTAG
CAGAACATTTAAATATTGCCGCGAATGCACCAGAGCGTTTTCAAGCGGCTATTTTAACAGAGCTGCTGTCATACTCATTA
AGTGAAGGACACACGTATATTGAAGCGCAAGTATTATTAGAGAAAGTCGTAACACTGTTAGAATCATCACGACGTTATCC
GGTGGAGCTTAGTGACGTAGCCGATCAAATCATTGCGTTGATTGATTTAGGAAAGATGCAGCAAGAAGGAACAAAGCTCT
TTCATAACAGTTTATTCTATGCAGAATGGGGCGTTTCACATGCCATTCATCGCTTACTTAAACGTAAACAATCAATTGAT
TATGATGAAGCAACTATTTTAGCATCTATTAAGCAGATGGAGACGGAATTAGGCATTGCTTATGGCCCTTCGCAAAAGAC
AGCTTTGATTGAAGGCGTTCAGTCTTCTTTCTTTATCTTGACAGGTGGCCCTGGTACAGGGAAAACGACGGTTATTAATG
GCCTCGTCCGATTATTCTCAGAGCTTAATGAGCTTTCTTTAGATATCAATGATTATCATAATGAGGTTTTTCCTATCTTA
TTAGCAGCGCCGACTGGTCGGGCAGCAAAGCGAATGAGTGAAACGACTGGATTACCGGCGAAGACGATACATCGTTTGCT
AGGATTAACTGGACAAGAAATGCATCCAGAAGAAATTGCAAATGAATTAGAAGGTAGTTTGCTGATTTTAGATGAAATGT
CGATGGTCGATACGTGGTTGGCAAATGCACTATTTAAAGCGATACCTACCAATATGCAAGTGATTATAGTTGGAGATAAA
GACCAGCTGCCATCTGTTGGGCCCGGTCAGGTTTTACACGATTTACTATCGATTCCCATGCTACCTCAATGTGAGTTAAC
AGATATTTATCGACAAGAAGATGGTTCGTCAATTATTGCTTTAGCACATGCGATTAAAGAAGGGACGTTGCCTACTGATT
TTACTCGTAATCAGAAAGACCGTTCTTTTATTGCAGGCAACACGTATCAAATAGAAGAAATGATTCGTCAAATTGTGGTC
AAAGCTGCAGAAAAAGGTTTTACAGCTTCCGATATACAAGTTTTAGCACCAATGTATCGCGGACCAGCTGGCATTGACCG
ATTGAATAAAATGTTACAAGAAGTGTTAAATCCTAATGAAAGTGGTCGTCGTAAAGAAGTAACGTGGTTTGAAACTGTTT
ATCGAATTGGTGATAAGGTTCTTCAACTGGTTAATGTTCCGGAAAATCAAGTTTATAATGGCGATATTGGAGAAATTACT
GGTATCATCTTAGCGAAAGAGCACGAAGATAAAGTGGATGTCTTGGTAGTCGATTTTGATGGAATAGAGGTGGAATATCC
ACGTAATCAGTGGCAGCAACTCACACTTGCTTATTGCTGTTCTATTCATAAGTCACAAGGGAGTGAATATCCGCTTGTGA
TTTTACCAATGGTTAATGGGTATTATCGAATGTTACAGCGTAATTTATTGTATACGGCGATTACGCGTAGTCAAGAGCGT
TTGATTTTATTGGGCGAACTGGAAGCTTATGAAACAGCTGTCAAGCATGAAGGTGCTAATCGTCAAACTGCTTTGAAAGA
ACGGATTATGGCAGAAACATTTCCGAGTACAACGTCACTTGATACCCAATCTCAAGAAGAAAGTATTCCTAAAGAAGAAA
TAGCTCAAGAACAACTTGAAACGCAAGCGTCATTTATCTTAACAAAAGAGTTAATTCTTTCTGGTGCCGTTGACCCTATG
ATTGGAATGGAAGGTATTACACCGTTTGATTACATTTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (588-659)

• Helix-hairpin-helix containing domain (HHH_RecD2) (156-246)

• AAA domain (AAA_30) (342-544)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (677-724)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.383	99.754	0.493