Detailed information NTG0686682

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: M2905_RS04285
• Genome accession: NZ_CP097051
• Coordinates: 891058..893496 (-)
• Length: 812 a.a.
• NCBI ID: WP_248857105.1
• Uniprot ID: -
• Organism: Vagococcus lutrae strain AT19
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 886058..898496

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M2905_RS04265 (M2905_04265)	-	887149..888435 (-)	1287	WP_222318626.1	YeeE/YedE family protein	-
M2905_RS04270 (M2905_04270)	-	888621..889505 (+)	885	WP_248857103.1	LysR family transcriptional regulator	-
M2905_RS04275 (M2905_04275)	-	889578..890528 (+)	951	WP_248857104.1	diacylglycerol kinase family protein	-
M2905_RS04280 (M2905_04280)	-	890559..891011 (-)	453	WP_248848770.1	hypothetical protein	-
M2905_RS04285 (M2905_04285)	recD2	891058..893496 (-)	2439	WP_248857105.1	ATP-dependent RecD-like DNA helicase	Machinery gene
M2905_RS04290 (M2905_04290)	-	893511..894560 (-)	1050	WP_248848768.1	SepM family pheromone-processing serine protease	-
M2905_RS04295 (M2905_04295)	coaD	894576..895079 (-)	504	WP_126760648.1	pantetheine-phosphate adenylyltransferase	-
M2905_RS04300 (M2905_04300)	rsmD	895076..895636 (-)	561	WP_222318670.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
M2905_RS04305 (M2905_04305)	-	895724..896008 (-)	285	WP_023606469.1	YlbG family protein	-
M2905_RS04310 (M2905_04310)	-	896001..896429 (-)	429	WP_023606468.1	YlbF family regulator	-
M2905_RS04315 (M2905_04315)	-	896431..897567 (-)	1137	WP_248857106.1	CAP-associated domain-containing protein	-

Sequence

Protein

• Length: 812 a.a.
• Molecular weight: 91256.01 Da
• Isoelectric Point: 4.5093

>NTDB_id=686682 M2905_RS04285 WP_248857105.1 891058..893496(-) (recD2) [Vagococcus lutrae strain AT19]
MVESEKDLQHTPKIIGRIQAIFYQNPTNFYKVMLIEVEESEPSIDELEMVVTGNFGDMMEGESYQFSGQFVTHPKYGRQF
QVERYEQVKPTSANGLIDYLSGDNFPGIGKKTAEKLVDYFGEETIDVIMNDSKRLDALDFLNEKRKDTIISGVKSNYGSE
KILIQLNEWGFGSQLAMTIFQKYQEQTLTLLEENPYRLIEDIEGIAFKKADKLAEHLNIAANAPERFQAAILTELLSYSL
SEGHTYIEAQVLLEKVVTLLESSRRYAVELSDVADQIIALIDLGKMQQEGTKLFHNSLFYAEWGVSHAIHRLLKRKQSID
YDEATILASIKQMETELGIAYGPSQKTALIEGVQSSFFILTGGPGTGKTTVINGLVRLFSELNELSLDINDYHNEVFPIL
LAAPTGRAAKRMSETTGLPAKTIHRLLGLTGQEMHPEEIANELEGSLLILDEMSMVDTWLANALFKAIPTNMQVIIVGDK
DQLPSVGPGQVLHDLLSIPMLPQCELTDIYRQEDGSSIIALAHAIKEGTLPTDFTRNQKDRSFIAGNTYQIEEMIRQIVV
KAAEKGFTASDIQVLAPMYRGPAGIDRLNKMLQEVLNPNESGRRKEVTWFETVYRIGDKVLQLVNVPENQVYNGDIGEIT
GIILAKEHEDKVDVLVVDFDGIEVEYPRNQWQQLTLAYCCSIHKSQGSEYPLVILPMVNGYYRMLQRNLLYTAITRSQER
LILLGELEAYETAVKHEGANRQTALKERIMAEAFPSTTSLDTQSQEESIPKEEIAQEQLETQASFILTKELILSGAVDPM
IGMEGITPFDYI

Nucleotide

• Length: 2439 bp

>NTDB_id=686682 M2905_RS04285 WP_248857105.1 891058..893496(-) (recD2) [Vagococcus lutrae strain AT19]
ATGGTAGAAAGTGAAAAAGATTTACAACATACGCCTAAAATAATAGGACGGATTCAAGCCATCTTTTATCAAAATCCTAC
TAATTTTTATAAAGTGATGTTGATTGAAGTGGAAGAAAGCGAGCCGTCAATTGATGAATTAGAAATGGTTGTAACAGGAA
ATTTTGGCGATATGATGGAAGGAGAAAGTTACCAGTTTTCTGGACAGTTTGTCACACATCCTAAGTATGGCCGTCAATTC
CAAGTGGAACGTTATGAACAGGTAAAACCAACCAGTGCTAATGGTTTAATTGACTATTTATCTGGGGATAACTTTCCCGG
AATTGGAAAAAAAACAGCTGAAAAATTAGTAGATTATTTTGGCGAAGAAACAATCGATGTCATTATGAATGATTCTAAAA
GATTAGACGCGTTAGATTTCTTAAATGAGAAACGAAAAGATACGATTATATCGGGAGTTAAAAGTAATTACGGGTCAGAA
AAAATCCTTATACAACTGAATGAATGGGGATTTGGTAGTCAATTAGCCATGACTATCTTTCAAAAGTATCAAGAACAAAC
ATTAACCCTCTTAGAAGAGAATCCTTATCGCTTGATTGAAGATATTGAAGGGATTGCGTTTAAAAAAGCTGATAAGTTAG
CAGAACATTTAAATATTGCCGCGAATGCACCAGAGCGTTTTCAAGCGGCTATTTTAACAGAGCTGCTGTCATACTCATTA
AGTGAAGGACATACGTATATTGAAGCACAAGTATTATTAGAGAAAGTCGTAACGCTGTTAGAATCATCACGACGTTATGC
GGTGGAGCTTAGTGACGTAGCCGATCAAATCATTGCGTTGATTGATTTAGGAAAAATGCAGCAAGAAGGAACAAAGCTCT
TTCATAACAGTTTATTCTATGCAGAATGGGGCGTTTCACATGCCATTCATCGCTTACTTAAACGTAAACAATCAATTGAT
TATGATGAAGCAACTATTTTAGCATCGATTAAGCAAATGGAGACGGAATTAGGCATTGCTTATGGCCCTTCGCAAAAGAC
AGCTTTGATTGAAGGCGTTCAGTCTTCTTTCTTTATCTTGACAGGTGGTCCTGGTACAGGGAAAACGACGGTCATTAATG
GCCTCGTCCGATTATTCTCAGAGCTTAATGAGCTTTCTTTAGATATCAATGATTATCATAATGAGGTCTTTCCTATCTTA
TTAGCAGCGCCGACTGGTCGGGCAGCAAAGCGAATGAGTGAAACGACTGGATTACCGGCGAAGACGATACATCGTTTGCT
AGGATTAACTGGACAAGAAATGCATCCAGAAGAAATTGCAAATGAATTAGAAGGTAGTTTGCTGATTTTAGATGAAATGT
CGATGGTCGATACGTGGTTGGCAAATGCACTATTTAAAGCGATACCTACCAATATGCAAGTGATTATAGTTGGAGATAAA
GACCAGCTGCCATCTGTTGGGCCCGGTCAGGTTTTACACGATTTACTATCGATTCCCATGCTACCTCAATGTGAGTTAAC
AGATATTTATCGACAAGAAGATGGTTCGTCAATTATTGCTTTAGCACATGCGATTAAAGAAGGGACGTTGCCTACTGATT
TTACTCGTAATCAGAAAGACCGTTCTTTTATTGCAGGCAACACGTATCAAATAGAAGAAATGATTCGTCAAATTGTGGTC
AAAGCTGCAGAAAAAGGTTTTACAGCTTCCGATATACAAGTTTTAGCACCGATGTATCGCGGACCAGCTGGCATTGACCG
ATTGAATAAAATGTTACAAGAAGTGTTAAATCCTAATGAAAGTGGTCGTCGTAAAGAAGTAACGTGGTTTGAAACTGTTT
ATCGAATTGGTGATAAGGTTCTTCAACTGGTTAATGTTCCGGAAAATCAAGTTTATAATGGCGATATTGGAGAAATTACT
GGTATCATCTTAGCGAAAGAGCACGAAGATAAAGTGGATGTCTTGGTAGTCGATTTTGATGGAATAGAAGTGGAATATCC
ACGTAATCAGTGGCAGCAACTCACACTTGCCTATTGCTGTTCTATTCATAAGTCACAAGGGAGTGAATACCCGCTTGTGA
TTTTACCAATGGTTAATGGTTATTATCGAATGCTACAGCGTAATTTATTGTATACGGCGATTACGCGTAGTCAAGAACGT
TTGATTTTATTGGGCGAACTGGAAGCTTATGAAACAGCTGTCAAGCATGAAGGTGCTAATCGTCAAACTGCTTTGAAAGA
ACGGATTATGGCAGAAGCATTTCCGAGTACAACGTCACTTGATACCCAATCTCAAGAAGAAAGTATTCCTAAAGAAGAAA
TAGCTCAAGAACAACTTGAAACGCAAGCGTCATTTATCTTAACAAAAGAGTTAATTCTTTCTGGTGCCGTTGACCCTATG
ATTGGAATGGAAGGTATTACACCGTTTGATTACATTTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (588-659)

• Helix-hairpin-helix containing domain (HHH_RecD2) (156-246)

• AAA domain (AAA_30) (342-544)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (677-724)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.506	99.754	0.494