Detailed information NTG0686239

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: M2919_RS09595
• Genome accession: NZ_CP097017
• Coordinates: 1996821..1999259 (+)
• Length: 812 a.a.
• NCBI ID: WP_248848769.1
• Uniprot ID: -
• Organism: Vagococcus lutrae strain AT46b
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1991821..2004259

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M2919_RS09565 (M2919_09565)	-	1992750..1993886 (+)	1137	WP_248848767.1	CAP-associated domain-containing protein	-
M2919_RS09570 (M2919_09570)	-	1993888..1994316 (+)	429	WP_023606468.1	YlbF family regulator	-
M2919_RS09575 (M2919_09575)	-	1994309..1994593 (+)	285	WP_023606469.1	YlbG family protein	-
M2919_RS09580 (M2919_09580)	rsmD	1994681..1995241 (+)	561	WP_126760649.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
M2919_RS09585 (M2919_09585)	coaD	1995238..1995741 (+)	504	WP_126760648.1	pantetheine-phosphate adenylyltransferase	-
M2919_RS09590 (M2919_09590)	-	1995757..1996806 (+)	1050	WP_248848768.1	SepM family pheromone-processing serine protease	-
M2919_RS09595 (M2919_09595)	recD2	1996821..1999259 (+)	2439	WP_248848769.1	ATP-dependent RecD-like DNA helicase	Machinery gene
M2919_RS09600 (M2919_09600)	-	1999306..1999758 (+)	453	WP_248848770.1	hypothetical protein	-
M2919_RS09605 (M2919_09605)	-	1999789..2000739 (-)	951	WP_248848771.1	diacylglycerol/lipid kinase family protein	-
M2919_RS09610 (M2919_09610)	-	2000812..2001696 (-)	885	WP_126760644.1	LysR family transcriptional regulator	-
M2919_RS09615 (M2919_09615)	-	2001882..2003168 (+)	1287	WP_126760643.1	YeeE/YedE family protein	-

Sequence

Protein

• Length: 812 a.a.
• Molecular weight: 91323.14 Da
• Isoelectric Point: 4.5434

>NTDB_id=686239 M2919_RS09595 WP_248848769.1 1996821..1999259(+) (recD2) [Vagococcus lutrae strain AT46b]
MVESEKDLHHTPKIIGRIQAIFYQNPTNFYKVMLIEVEESEPSIDELEMVVTGNFGDMMEGESYQFSGQFVTHPKYGRQF
QVERYEQVKPTSANGLIDYLSGDNFPGIGKKTAEKLVDYFGEETIDVIMNDTERLDALDFLNKKRKDTIISGVKSNYGSE
KILIQLNEWGFGSQLAMTIFQKYQEQTLTLLEENPYRLIEDIEGIAFKKADKLAEQLNIAANSPERFQAAILTELLSYSL
SEGHTYIEAQVLLEKVVTLLESSRRYPVELGDVADQIIALIDLGKMQQEGTKLFHNSLFYAEWGVSHAIHRLLKRKQSID
YDEATILASIKQMETELGIAYGPSQKTALIEGVQSSFFILTGGPGTGKTTVINGLVRLFSELNELSLDINDYHNEVFPIL
LAAPTGRAAKRMSETTGLPAKTIHRLLGLTGQEMHPEEIANELEGSLLILDEMSMVDTWLANALFKAIPTNMQVIIVGDK
DQLPSVGPGQVLHDLLSIPMLPQCELTDIYRQEDGSSIIALAHAIKEGTLPSDFTRNQKDRSFIAGNTYQIEEMIRQIVV
KAAEKGFTASDIQVLAPMYRGPAGIDRLNKMLQEVLNPNESGRRKEVTWFETVYRIGDKVLQLVNVPENQVYNGDIGEIT
GIILAKEHEDKVDVLVVDFDGIEVEYPRNQWQQLTLAYCCSIHKSQGSEYPLVILPMVNGYYRMLQRNLLYTAITRSQER
LILLGELEAYETAVKHEGANRQTALKERIMAETFPSTTSLDRQSQVESIPKEEIAQEQLETQASFILTKELILSGAVDPM
IGMEGITPFDYI

Nucleotide

• Length: 2439 bp

>NTDB_id=686239 M2919_RS09595 WP_248848769.1 1996821..1999259(+) (recD2) [Vagococcus lutrae strain AT46b]
ATGGTAGAAAGTGAAAAAGATTTACATCATACGCCTAAAATAATAGGACGGATTCAAGCCATCTTTTATCAAAATCCTAC
TAATTTTTATAAAGTGATGTTGATTGAAGTGGAAGAAAGCGAGCCGTCAATTGATGAATTAGAAATGGTTGTAACAGGAA
ATTTTGGCGATATGATGGAAGGAGAAAGCTACCAGTTTTCTGGACAGTTTGTCACACATCCTAAGTATGGCCGTCAATTC
CAAGTGGAACGTTATGAACAGGTAAAACCAACCAGTGCTAATGGTTTAATTGACTATTTATCTGGGGATAACTTTCCCGG
AATTGGAAAAAAAACAGCTGAAAAATTAGTAGATTATTTTGGCGAAGAAACAATTGATGTCATTATGAATGATACTGAAA
GATTAGACGCGTTAGATTTTTTAAATAAAAAACGAAAAGATACGATTATATCGGGAGTTAAAAGTAATTACGGGTCAGAA
AAAATCCTTATTCAACTGAATGAATGGGGATTTGGTAGTCAATTAGCCATGACTATCTTTCAAAAGTATCAGGAACAAAC
ATTAACCCTCTTAGAAGAGAATCCTTATCGCTTGATTGAAGATATTGAAGGGATTGCGTTTAAAAAAGCTGATAAGTTAG
CAGAACAATTAAATATTGCCGCGAATTCACCAGAGCGTTTTCAAGCGGCTATTTTAACAGAACTGCTGTCGTATTCATTA
AGTGAAGGACACACGTATATTGAAGCGCAAGTATTATTAGAGAAAGTCGTAACACTGTTAGAATCATCCCGACGTTATCC
GGTGGAGCTTGGTGATGTAGCCGATCAAATCATTGCTTTGATTGATTTAGGAAAAATGCAGCAAGAAGGAACAAAGCTTT
TTCATAACAGTTTATTCTATGCAGAATGGGGCGTTTCACATGCCATTCATCGCTTACTCAAACGTAAACAATCAATTGAT
TATGATGAAGCAACTATTTTAGCATCCATTAAGCAAATGGAGACGGAATTAGGCATTGCTTATGGCCCTTCGCAAAAGAC
AGCTTTGATTGAAGGCGTTCAGTCTTCTTTCTTTATCTTGACAGGTGGCCCTGGTACAGGGAAAACGACGGTTATTAATG
GCCTCGTCCGATTATTCTCAGAGCTTAATGAGCTTTCTTTAGATATCAATGATTATCATAATGAGGTCTTTCCTATCTTA
TTAGCAGCGCCGACTGGTCGGGCAGCAAAGCGAATGAGTGAAACGACTGGATTACCGGCGAAGACGATACATCGTTTGCT
AGGATTAACCGGACAAGAAATGCATCCAGAAGAAATTGCAAATGAATTAGAAGGTAGTTTGCTGATTTTAGATGAAATGT
CGATGGTCGATACGTGGTTGGCAAATGCACTATTTAAAGCGATACCTACCAATATGCAAGTGATTATAGTTGGAGATAAA
GACCAGCTGCCGTCTGTTGGGCCCGGTCAGGTTTTACACGATTTGCTATCGATTCCCATGCTACCTCAATGTGAGTTAAC
AGATATTTATCGACAAGAAGATGGTTCGTCAATTATTGCTTTAGCACATGCGATTAAAGAAGGGACGTTGCCTAGTGATT
TTACTCGTAATCAAAAAGACCGTTCTTTTATTGCAGGCAACACGTATCAAATAGAAGAAATGATTCGTCAAATTGTGGTC
AAAGCTGCAGAAAAAGGTTTTACAGCTTCCGATATACAAGTTTTAGCACCGATGTATCGCGGACCAGCTGGCATTGACCG
ATTGAATAAAATGTTACAAGAAGTGTTAAATCCTAATGAAAGTGGTCGTCGTAAAGAAGTAACGTGGTTTGAAACTGTTT
ATCGAATTGGTGATAAGGTTCTTCAACTGGTTAATGTTCCAGAAAATCAAGTTTACAATGGCGATATTGGAGAAATTACT
GGTATTATCTTAGCAAAAGAGCATGAAGATAAAGTGGATGTCTTGGTAGTCGATTTTGATGGAATAGAAGTGGAATATCC
ACGTAATCAGTGGCAGCAACTCACACTTGCCTATTGCTGTTCTATTCATAAGTCACAAGGGAGTGAATACCCGCTTGTGA
TTTTGCCAATGGTTAATGGTTATTATCGAATGTTACAGCGTAATTTATTGTATACGGCGATTACGCGTAGTCAAGAGCGT
TTGATTTTATTGGGCGAACTGGAAGCTTATGAAACAGCTGTCAAGCATGAAGGTGCTAATCGTCAAACTGCTTTGAAAGA
ACGGATTATGGCAGAAACATTTCCGAGTACAACGTCACTTGATAGGCAATCTCAAGTAGAAAGTATTCCTAAAGAAGAAA
TAGCTCAAGAACAACTTGAAACGCAAGCGTCATTTATCTTAACAAAAGAGTTAATTCTTTCTGGTGCCGTTGACCCTATG
ATTGGAATGGAAGGTATTACACCGTTTGATTACATTTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (156-246)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (588-659)

• AAA domain (AAA_30) (342-544)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (677-724)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.63	99.754	0.495