Detailed information NTG0684419

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: M1R67_RS09035
• Genome accession: NZ_CP096818
• Coordinates: 1889070..1889771 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain Mu1984
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1884070..1894771

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M1R67_RS09000 (M1R67_08990)	kdsB	1884593..1885354 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
M1R67_RS09005 (M1R67_08995)	-	1885366..1886346 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
M1R67_RS09010 (M1R67_09000)	-	1886358..1886699 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
M1R67_RS09015 (M1R67_09005)	-	1886717..1887490 (+)	774	WP_000497298.1	TatD family hydrolase	-
M1R67_RS09020 (M1R67_09010)	-	1887528..1888136 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
M1R67_RS09025 (M1R67_09015)	-	1888146..1888700 (+)	555	WP_000841373.1	type II secretion system protein	-
M1R67_RS09030 (M1R67_09020)	xcpV	1888690..1889070 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
M1R67_RS09035 (M1R67_09025)	xcpW	1889070..1889771 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
M1R67_RS09040 (M1R67_09030)	gspK	1889771..1890730 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
M1R67_RS09045 (M1R67_09035)	-	1890961..1891557 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
M1R67_RS09050 (M1R67_09040)	ung	1891608..1892321 (+)	714	WP_284634993.1	uracil-DNA glycosylase	-
M1R67_RS09055 (M1R67_09045)	-	1892318..1893442 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
M1R67_RS09060 (M1R67_09050)	tadA	1893449..1893952 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
M1R67_RS09065 (M1R67_09055)	-	1894022..1894465 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=684419 M1R67_RS09035 WP_000594589.1 1889070..1889771(+) (xcpW) [Acinetobacter baumannii strain Mu1984]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=684419 M1R67_RS09035 WP_000594589.1 1889070..1889771(+) (xcpW) [Acinetobacter baumannii strain Mu1984]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996