Detailed information NTG0684119

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: M1S47_RS08340
• Genome accession: NZ_CP096768
• Coordinates: 1753713..1754414 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 5388
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1748713..1759414

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M1S47_RS08305 (M1S47_08305)	kdsB	1749236..1749997 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
M1S47_RS08310 (M1S47_08310)	-	1750009..1750989 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
M1S47_RS08315 (M1S47_08315)	-	1751001..1751342 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
M1S47_RS08320 (M1S47_08320)	-	1751360..1752133 (+)	774	WP_000497298.1	TatD family hydrolase	-
M1S47_RS08325 (M1S47_08325)	-	1752171..1752779 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
M1S47_RS08330 (M1S47_08330)	-	1752789..1753343 (+)	555	WP_000841373.1	type II secretion system protein	-
M1S47_RS08335 (M1S47_08335)	xcpV	1753333..1753713 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
M1S47_RS08340 (M1S47_08340)	xcpW	1753713..1754414 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
M1S47_RS08345 (M1S47_08345)	gspK	1754414..1755373 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
M1S47_RS08350 (M1S47_08350)	-	1755604..1756200 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
M1S47_RS08355 (M1S47_08355)	ung	1756251..1756964 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
M1S47_RS08360 (M1S47_08360)	-	1756961..1758085 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
M1S47_RS08365 (M1S47_08365)	tadA	1758092..1758595 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
M1S47_RS08370 (M1S47_08370)	-	1758665..1759108 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=684119 M1S47_RS08340 WP_000594589.1 1753713..1754414(+) (xcpW) [Acinetobacter baumannii strain 5388]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=684119 M1S47_RS08340 WP_000594589.1 1753713..1754414(+) (xcpW) [Acinetobacter baumannii strain 5388]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996