Detailed information NTG0683733

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: M1S28_RS07780
• Genome accession: NZ_CP096749
• Coordinates: 1625354..1626055 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 5666
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1620354..1631055

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M1S28_RS07745 (M1S28_07745)	kdsB	1620877..1621638 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
M1S28_RS07750 (M1S28_07750)	-	1621650..1622630 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
M1S28_RS07755 (M1S28_07755)	-	1622642..1622983 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
M1S28_RS07760 (M1S28_07760)	-	1623001..1623774 (+)	774	WP_000497298.1	TatD family hydrolase	-
M1S28_RS07765 (M1S28_07765)	-	1623812..1624420 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
M1S28_RS07770 (M1S28_07770)	-	1624430..1624984 (+)	555	WP_000841373.1	type II secretion system protein	-
M1S28_RS07775 (M1S28_07775)	xcpV	1624974..1625354 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
M1S28_RS07780 (M1S28_07780)	xcpW	1625354..1626055 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
M1S28_RS07785 (M1S28_07785)	gspK	1626055..1627014 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
M1S28_RS07790 (M1S28_07790)	-	1627245..1627841 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
M1S28_RS07795 (M1S28_07795)	ung	1627892..1628605 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
M1S28_RS07800 (M1S28_07800)	-	1628602..1629726 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
M1S28_RS07805 (M1S28_07805)	tadA	1629733..1630236 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
M1S28_RS07810 (M1S28_07810)	-	1630306..1630749 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=683733 M1S28_RS07780 WP_000594589.1 1625354..1626055(+) (xcpW) [Acinetobacter baumannii strain 5666]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=683733 M1S28_RS07780 WP_000594589.1 1625354..1626055(+) (xcpW) [Acinetobacter baumannii strain 5666]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996