Detailed information NTG0683450

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: M1S30_RS08290
• Genome accession: NZ_CP096735
• Coordinates: 1739783..1740484 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 5683
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1734783..1745484

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M1S30_RS08255 (M1S30_08255)	kdsB	1735306..1736067 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
M1S30_RS08260 (M1S30_08260)	-	1736079..1737059 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
M1S30_RS08265 (M1S30_08265)	-	1737071..1737412 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
M1S30_RS08270 (M1S30_08270)	-	1737430..1738203 (+)	774	WP_000497298.1	TatD family hydrolase	-
M1S30_RS08275 (M1S30_08275)	-	1738241..1738849 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
M1S30_RS08280 (M1S30_08280)	-	1738859..1739413 (+)	555	WP_000841373.1	type II secretion system protein	-
M1S30_RS08285 (M1S30_08285)	xcpV	1739403..1739783 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
M1S30_RS08290 (M1S30_08290)	xcpW	1739783..1740484 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
M1S30_RS08295 (M1S30_08295)	gspK	1740484..1741443 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
M1S30_RS08300 (M1S30_08300)	-	1741674..1742270 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
M1S30_RS08305 (M1S30_08305)	ung	1742321..1743034 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
M1S30_RS08310 (M1S30_08310)	-	1743031..1744155 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
M1S30_RS08315 (M1S30_08315)	tadA	1744162..1744665 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
M1S30_RS08320 (M1S30_08320)	-	1744735..1745178 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=683450 M1S30_RS08290 WP_000594589.1 1739783..1740484(+) (xcpW) [Acinetobacter baumannii strain 5683]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=683450 M1S30_RS08290 WP_000594589.1 1739783..1740484(+) (xcpW) [Acinetobacter baumannii strain 5683]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996