Detailed information NTG0683065

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: OKW88_RS07455
• Genome accession: NZ_CP110105
• Coordinates: 1451928..1453193 (+)
• Length: 421 a.a.
• NCBI ID: WP_131227724.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain CF03
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1446928..1458193

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OKW88_RS07435 (OKW88_07420)	yrrB	1448299..1448919 (-)	621	WP_015251572.1	tetratricopeptide repeat protein	-
OKW88_RS07440 (OKW88_07425)	mnmA	1449005..1450120 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
OKW88_RS07445 (OKW88_07430)	iscSA	1450148..1451290 (-)	1143	WP_131227722.1	cysteine desulfurase family protein	-
OKW88_RS07450 (OKW88_07435)	cymR	1451309..1451725 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
OKW88_RS07455 (OKW88_07440)	rarA	1451928..1453193 (+)	1266	WP_131227724.1	replication-associated recombination protein A	Machinery gene
OKW88_RS07460 (OKW88_07445)	tcdA	1453234..1453998 (-)	765	WP_014480428.1	ThiF family adenylyltransferase	-
OKW88_RS07470 (OKW88_07455)	aspS	1454334..1456112 (-)	1779	WP_015384241.1	aspartate--tRNA ligase	-
OKW88_RS07475 (OKW88_07460)	hisS	1456126..1457400 (-)	1275	WP_326227525.1	histidine--tRNA ligase	-
OKW88_RS07480 (OKW88_07465)	yrzK	1457782..1457952 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46530.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=683065 OKW88_RS07455 WP_131227724.1 1451928..1453193(+) (rarA) [Bacillus subtilis strain CF03]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALTDIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=683065 OKW88_RS07455 WP_131227724.1 1451928..1453193(+) (rarA) [Bacillus subtilis strain CF03]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATCGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGACAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.525	100	0.995