Detailed information NTG0682410

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: M1S24_RS08835
• Genome accession: NZ_CP096686
• Coordinates: 1852930..1853631 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 5846
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1847930..1858631

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M1S24_RS08800 (M1S24_08800)	kdsB	1848453..1849214 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
M1S24_RS08805 (M1S24_08805)	-	1849226..1850206 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
M1S24_RS08810 (M1S24_08810)	-	1850218..1850559 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
M1S24_RS08815 (M1S24_08815)	-	1850577..1851350 (+)	774	WP_000497298.1	TatD family hydrolase	-
M1S24_RS08820 (M1S24_08820)	-	1851388..1851996 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
M1S24_RS08825 (M1S24_08825)	-	1852006..1852560 (+)	555	WP_000841373.1	type II secretion system protein	-
M1S24_RS08830 (M1S24_08830)	xcpV	1852550..1852930 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
M1S24_RS08835 (M1S24_08835)	xcpW	1852930..1853631 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
M1S24_RS08840 (M1S24_08840)	gspK	1853631..1854590 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
M1S24_RS08845 (M1S24_08845)	-	1854821..1855417 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
M1S24_RS08850 (M1S24_08850)	ung	1855468..1856181 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
M1S24_RS08855 (M1S24_08855)	-	1856178..1857302 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
M1S24_RS08860 (M1S24_08860)	tadA	1857309..1857812 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
M1S24_RS08865 (M1S24_08865)	-	1857882..1858325 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=682410 M1S24_RS08835 WP_000594589.1 1852930..1853631(+) (xcpW) [Acinetobacter baumannii strain 5846]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=682410 M1S24_RS08835 WP_000594589.1 1852930..1853631(+) (xcpW) [Acinetobacter baumannii strain 5846]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996