Detailed information NTG0682317

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: M1S44_RS08745
• Genome accession: NZ_CP096682
• Coordinates: 1830818..1831519 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 5955
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1825818..1836519

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M1S44_RS08710 (M1S44_08710)	kdsB	1826341..1827102 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
M1S44_RS08715 (M1S44_08715)	-	1827114..1828094 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
M1S44_RS08720 (M1S44_08720)	-	1828106..1828447 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
M1S44_RS08725 (M1S44_08725)	-	1828465..1829238 (+)	774	WP_000497298.1	TatD family hydrolase	-
M1S44_RS08730 (M1S44_08730)	-	1829276..1829884 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
M1S44_RS08735 (M1S44_08735)	-	1829894..1830448 (+)	555	WP_000841373.1	type II secretion system protein	-
M1S44_RS08740 (M1S44_08740)	xcpV	1830438..1830818 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
M1S44_RS08745 (M1S44_08745)	xcpW	1830818..1831519 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
M1S44_RS08750 (M1S44_08750)	gspK	1831519..1832478 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
M1S44_RS08755 (M1S44_08755)	-	1832709..1833305 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
M1S44_RS08760 (M1S44_08760)	ung	1833356..1834069 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
M1S44_RS08765 (M1S44_08765)	-	1834066..1835190 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
M1S44_RS08770 (M1S44_08770)	tadA	1835197..1835700 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
M1S44_RS08775 (M1S44_08775)	-	1835770..1836213 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=682317 M1S44_RS08745 WP_000594589.1 1830818..1831519(+) (xcpW) [Acinetobacter baumannii strain 5955]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=682317 M1S44_RS08745 WP_000594589.1 1830818..1831519(+) (xcpW) [Acinetobacter baumannii strain 5955]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterProScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996