Detailed information NTG0682124

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: M1M80_RS13925
• Genome accession: NZ_CP096592
• Coordinates: 2753815..2756211 (-)
• Length: 798 a.a.
• NCBI ID: WP_003237483.1
• Uniprot ID: -
• Organism: Bacillus inaquosorum strain A65.1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2748815..2761211

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M1M80_RS13890 (M1M80_13890)	-	2749887..2750615 (+)	729	WP_060399132.1	amino acid ABC transporter ATP-binding protein	-
M1M80_RS13895 (M1M80_13895)	glnH	2750637..2751458 (+)	822	WP_003237479.1	glutamine ABC transporter substrate-binding protein GlnH	-
M1M80_RS13900 (M1M80_13900)	-	2751519..2752169 (+)	651	WP_003237480.1	amino acid ABC transporter permease	-
M1M80_RS13905 (M1M80_13905)	-	2752186..2752842 (+)	657	WP_003237481.1	amino acid ABC transporter permease	-
M1M80_RS13910 (M1M80_13910)	-	2752878..2753009 (-)	132	WP_003225895.1	YrzQ family protein	-
M1M80_RS13915 (M1M80_13915)	-	2753031..2753222 (-)	192	WP_003225893.1	hypothetical protein	-
M1M80_RS13920 (M1M80_13920)	-	2753234..2753758 (-)	525	WP_080429038.1	PRC-barrel domain-containing protein	-
M1M80_RS13925 (M1M80_13925)	recD2	2753815..2756211 (-)	2397	WP_003237483.1	ATP-dependent RecD-like DNA helicase	Machinery gene
M1M80_RS13930 (M1M80_13930)	-	2756236..2756856 (-)	621	WP_232919234.1	tetratricopeptide repeat protein	-
M1M80_RS13935 (M1M80_13935)	mnmA	2756942..2758057 (-)	1116	WP_060399134.1	tRNA 2-thiouridine(34) synthase MnmA	-
M1M80_RS13940 (M1M80_13940)	-	2758085..2759227 (-)	1143	WP_003237487.1	cysteine desulfurase family protein	-
M1M80_RS13945 (M1M80_13945)	cymR	2759246..2759662 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
M1M80_RS13950 (M1M80_13950)	-	2759864..2761129 (+)	1266	WP_060399135.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 89155.77 Da
• Isoelectric Point: 5.0321

>NTDB_id=682124 M1M80_RS13925 WP_003237483.1 2753815..2756211(-) (recD2) [Bacillus inaquosorum strain A65.1]
MQQHPDQLKLEEEPYLKGTVNTVIYHNDTNLYTVLKVKVTETSEAIEDKAVSVTGYFPALQEEETYTFYGKIVTHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADASVLYDVPKLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFGKADELGSRMGLSGNHPERVKAAILYTLETT
CLSEGHTYIETEKLIIDTQSLLNQSAREGQRITEMDAANAIIALGENKDIVIEDGRCYFPSLFYAEQNVAKRVKHIASQT
EYDDQFPESEFLLALGELEERMNVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSAYKKD
EAFPVVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDEPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHQMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPREKRREIKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFNQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSLQVEEMDAELEALQKELPFSVHDANIGMEGITPFDFMKEEQL

Nucleotide

• Length: 2397 bp

>NTDB_id=682124 M1M80_RS13925 WP_003237483.1 2753815..2756211(-) (recD2) [Bacillus inaquosorum strain A65.1]
GTGCAGCAGCATCCGGATCAGCTTAAACTGGAGGAAGAGCCCTATTTAAAAGGGACAGTCAACACAGTCATCTATCATAA
TGACACCAATTTATATACGGTTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCTATTGAAGATAAAGCCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAGATCGTAACCCATCCAAAATTCGGGCTC
CAATTTCAGGCGGAGCATTTCAAAAAGGAGATTCCGACGACTAAGGAAGGCATCATTCAATATTTATCGAGTGATTTGTT
CGAGGGAATCGGCAAAAAAACAGCCGAGGAAATTGTGAAAAAGCTGGGCGACAGCGCTATTAATAAAATATTGGCTGACG
CTTCAGTGCTTTATGACGTTCCGAAGCTGTCAAAAAAGAAAGCTGATACGCTGGCCGGCGCCTTGCAGCGTCATCAGGGA
CTGGAGCAAATCATGATTTCCCTGAATCAGTTTGGCTTCGGCCCGCAGCTGTCTATGAAAATCTACCAAGCCTATGAATC
CGAGACGCTTGAAAAGATTCAGGAAAACCCTTATCAGCTTGTGAAAGATGTAGAAGGCATCGGATTTGGGAAAGCGGATG
AGCTGGGCAGCAGAATGGGCCTTTCGGGTAATCACCCTGAGCGGGTAAAAGCCGCCATATTGTACACGCTTGAAACGACT
TGTCTGTCAGAAGGGCATACGTACATAGAAACGGAGAAGCTGATTATTGACACCCAATCTCTGTTAAATCAATCAGCTCG
GGAGGGACAGCGCATCACTGAAATGGATGCCGCTAACGCGATTATTGCCCTTGGAGAAAATAAAGACATTGTCATAGAAG
ATGGCCGCTGTTATTTTCCATCGCTGTTTTACGCTGAACAAAATGTTGCTAAGCGAGTGAAACATATCGCAAGCCAAACT
GAATATGATGACCAGTTTCCCGAATCAGAATTTCTGCTCGCTTTAGGAGAACTGGAAGAACGGATGAACGTTCAGTATGC
CCCTAGCCAGAAGGAAGCGATTCAAAAAGCCCTTTCCTCACCGATGCTTCTTTTAACGGGGGGACCGGGAACAGGGAAAA
CGACGGTAATCAGAGGGATTGTCGAACTGTACGGAGAGCTTCACGGTGTGTCACTCGACCCGTCAGCGTATAAAAAGGAT
GAAGCTTTTCCGGTTGTATTGGCCGCACCGACAGGAAGAGCGGCGAAACGGATGAGTGAATCAACGGGGCTTCCGGCAGT
GACGATTCACAGGCTGCTTGGCTGGAACGGCGCTGAAGGATTTACCCATACAGAGGATGAGCCGATTGAAGGGAAGCTGT
TAATAATCGATGAAGCCAGCATGCTTGATATATGGCTGGCGAACCATTTGTTCAAGGCGATCCCTGATCATATTCAAATC
ATCATTGTCGGTGACGAAGATCAGCTGCCTTCTGTCGGTCCGGGCCAAGTGCTGAGAGACCTTTTGGCATCCCAGGTGAT
ACCGACTGTGAGACTGACAGACATCTACCGCCAGGCGGAGGGTTCATCGATTGTCGAGCTTGCCCACCAAATGAAAAATG
GGTTGCTGCCAAACAATTTGACTGCCCCGACGAAGGACCGTTCCTTTATTCGCTGCGGAGGCTCGCAAATTAAAGAGGTA
GTTGAGAAGGTTGTCGCCAATGCATTGAAAAAAGGCTATACGGCAAAGGACATTCAGGTTCTCGCCCCGATGTACAGAGG
AAAAGCCGGGATCAATGAACTGAATGTGATGCTACAGGATATTTTGAATCCTCCTAGAGAAAAACGGAGGGAAATAAAGT
TCGGGGATGTTGTCTACAGAACCGGGGATAAAATTTTGCAGCTCGTCAATCAGCCGGAAAACAATGTGTTCAACGGAGAC
ATTGGCGAAATTACATCGATATTTTATGCGAAGGAAAATACAGAAAAAGAAGATATGGCCGTCGTTTCTTTTGACGGCAA
TGAAATGACGTTTACGAAAAAAGATTTTAACCAGTTTACCCATGCGTATTGCTGCTCTATTCATAAATCGCAGGGAAGTG
AATTTCCGATTGTGGTTTTGCCTGTTGTGAAAGGCTATTATAGAATGCTCAGAAGAAACCTTCTTTATACCGCTATTACA
AGAGCAAAGAAATTTCTCATTTTATGCGGAGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAACGACGCAACTGTCAG
ACAGACTTCTTTGAAAAACAGGCTGTCATTACAGGTTGAGGAAATGGATGCTGAGCTTGAAGCTTTGCAAAAGGAGCTCC
CATTCAGCGTACACGATGCCAATATTGGCATGGAAGGCATTACACCATTCGATTTTATGAAAGAAGAACAGCTGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

• AAA domain (AAA_30) (346-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	98.745	99.875	0.986