Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | M1F48_RS08600 | Genome accession | NZ_CP096532 |
| Coordinates | 1734793..1735092 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain RIVM_M083782 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1729793..1740092
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M1F48_RS08575 (M1F48_08550) | gcvPA | 1731005..1732351 (-) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| M1F48_RS08580 (M1F48_08555) | gcvT | 1732371..1733462 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| M1F48_RS08585 (M1F48_08560) | - | 1733621..1734145 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| M1F48_RS08590 (M1F48_08565) | - | 1734135..1734281 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| M1F48_RS08595 (M1F48_08570) | comGF | 1734378..1734875 (-) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| M1F48_RS08600 (M1F48_08575) | comGE | 1734793..1735092 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| M1F48_RS08605 (M1F48_08580) | comGD | 1735079..1735525 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| M1F48_RS08610 (M1F48_08585) | comGC | 1735503..1735814 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| M1F48_RS08615 (M1F48_08590) | comGB | 1735828..1736898 (-) | 1071 | WP_267428886.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| M1F48_RS08620 (M1F48_08595) | comGA | 1736870..1737844 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| M1F48_RS08625 (M1F48_08600) | - | 1737896..1738519 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| M1F48_RS08630 (M1F48_08605) | - | 1738516..1738845 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| M1F48_RS08635 (M1F48_08610) | - | 1738845..1739831 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| M1F48_RS08640 (M1F48_08615) | - | 1739828..1740031 (-) | 204 | WP_000087559.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=681607 M1F48_RS08600 WP_000844413.1 1734793..1735092(-) (comGE) [Staphylococcus aureus strain RIVM_M083782]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=681607 M1F48_RS08600 WP_000844413.1 1734793..1735092(-) (comGE) [Staphylococcus aureus strain RIVM_M083782]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |