Detailed information NTG0067827

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: NALG_RS07265
• Genome accession: NZ_AP017373
• Coordinates: 1464708..1465643 (+)
• Length: 311 a.a.
• NCBI ID: WP_096369052.1
• Uniprot ID: -
• Organism: Lactococcus formosensis strain 122061
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1459708..1470643

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NALG_RS07230	-	1459874..1460029 (-)	156	WP_231951089.1	prepilin peptidase	-
NALG_RS07235 (NALG_1442)	-	1460140..1460586 (+)	447	WP_096369051.1	Dps family protein	-
NALG_RS07240 (NALG_1443)	-	1460626..1461006 (-)	381	WP_017368654.1	rhodanese-like domain-containing protein	-
NALG_RS07245 (NALG_1444)	-	1461023..1461991 (-)	969	WP_017368653.1	ROK family glucokinase	-
NALG_RS07250 (NALG_1445)	-	1461984..1462196 (-)	213	WP_003133311.1	YqgQ family protein	-
NALG_RS07255 (NALG_1446)	typA	1462516..1464357 (+)	1842	WP_017368652.1	translational GTPase TypA	-
NALG_RS07260 (NALG_1447)	-	1464432..1464662 (+)	231	WP_017368651.1	DUF3165 family protein	-
NALG_RS07265 (NALG_1448)	comYH	1464708..1465643 (+)	936	WP_096369052.1	class I SAM-dependent methyltransferase	Machinery gene
NALG_RS07270 (NALG_1449)	-	1465728..1466921 (+)	1194	WP_096369053.1	acetate kinase	-
NALG_RS07275 (NALG_1450)	-	1467039..1468232 (+)	1194	WP_096369054.1	acetate kinase	-
NALG_RS07280 (NALG_1451)	pyrH	1468323..1469039 (+)	717	WP_019292238.1	UMP kinase	-
NALG_RS07285 (NALG_1452)	frr	1469068..1469625 (+)	558	WP_017368646.1	ribosome recycling factor	-
NALG_RS07290 (NALG_1453)	-	1469735..1470595 (+)	861	WP_096369055.1	S1 RNA-binding domain-containing protein	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 34965.92 Da
• Isoelectric Point: 4.5506

>NTDB_id=67827 NALG_RS07265 WP_096369052.1 1464708..1465643(+) (comYH) [Lactococcus formosensis strain 122061]
MDIEKIEKAFGLVLENIMTIQAELMTDFYDAFVEQNAAYLGALELASLTKENNDKVRSMNLTKSEWQKLFQFVLLQGSRI
APMQANHNLTPDSIGFIFNFIIEELHKDRSIRVLEFGSGTGNLAETLLVHLQKEVDYVGFEVDDLLLDLSASMSEVMGTE
ASFLQMDAVKPQPLEAVDVALSDLPVGYYPDDEAASHFQVHDKSEHSYVHHLMIEQSFKYLKESGFALFLAPDNLLTSAQ
SEFLKAWIKEHAHIAAVITLPSSLFKGAGKSIYLLSKNQTNTPTFVYPLSDLADRSILQEFMSEFVKNVKI

Nucleotide

• Length: 936 bp

>NTDB_id=67827 NALG_RS07265 WP_096369052.1 1464708..1465643(+) (comYH) [Lactococcus formosensis strain 122061]
ATGGATATAGAGAAAATCGAAAAAGCTTTTGGGTTGGTCCTTGAGAATATCATGACAATTCAAGCAGAGCTGATGACGGA
TTTTTATGATGCTTTTGTGGAACAAAATGCAGCTTACTTAGGCGCCTTAGAGCTGGCGTCACTGACGAAGGAAAATAACG
ATAAAGTTCGTTCAATGAATCTTACGAAAAGTGAATGGCAAAAACTGTTTCAGTTTGTCTTGTTACAAGGCTCTCGTATT
GCACCGATGCAAGCAAATCATAATTTAACACCGGACTCTATTGGTTTTATCTTTAATTTCATCATTGAAGAGTTGCACAA
GGACCGATCGATTCGCGTGTTAGAGTTTGGTTCAGGAACGGGGAATTTAGCGGAAACGCTCTTGGTTCATCTGCAAAAAG
AAGTAGACTATGTTGGTTTTGAAGTAGACGACCTCTTGTTGGATTTATCTGCTTCAATGTCAGAAGTCATGGGAACAGAA
GCAAGTTTTCTCCAAATGGATGCTGTTAAACCTCAGCCCTTGGAAGCTGTGGACGTTGCCCTAAGTGATCTCCCAGTTGG
TTATTATCCAGACGATGAAGCTGCTAGCCATTTTCAAGTACATGACAAATCAGAACATAGCTATGTGCACCACTTAATGA
TCGAGCAATCCTTCAAGTATTTGAAAGAGAGTGGCTTTGCACTTTTCTTAGCTCCAGATAATCTTTTGACAAGTGCACAG
TCAGAGTTTTTGAAGGCCTGGATTAAAGAACATGCACATATTGCTGCAGTCATTACATTACCTTCATCCCTCTTTAAAGG
GGCAGGAAAATCGATTTATTTATTAAGTAAAAACCAGACAAATACACCGACTTTTGTTTACCCCTTATCTGACTTAGCAG
ACCGCTCTATTTTGCAAGAATTTATGTCTGAGTTTGTGAAAAATGTCAAGATTTGA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (199-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	49.677	99.678	0.495
comYH	Streptococcus mutans UA159	49.355	99.678	0.492