Detailed information    

insolico Bioinformatically predicted

Overview

Name   abrB   Type   Regulator
Locus tag   MXH81_RS06955 Genome accession   NZ_CP095759
Coordinates   1398547..1398825 (+) Length   92 a.a.
NCBI ID   WP_024424746.1    Uniprot ID   A0AAP7QQG0
Organism   Bacillus safensis strain ZK-1     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context

Location: 1393547..1403825
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MXH81_RS06930 (MXH81_06930) - 1393640..1393915 (-) 276 WP_024424743.1 hypothetical protein -
  MXH81_RS06935 (MXH81_06935) - 1394059..1395678 (+) 1620 WP_024426884.1 ATP-binding cassette domain-containing protein -
  MXH81_RS06940 (MXH81_06940) - 1395717..1396949 (-) 1233 WP_024424744.1 aminopeptidase -
  MXH81_RS06945 (MXH81_06945) - 1397057..1397188 (-) 132 WP_003210922.1 protein YkpC -
  MXH81_RS06950 (MXH81_06950) mreBH 1397263..1398270 (-) 1008 WP_024424745.1 rod-share determining protein MreBH -
  MXH81_RS06955 (MXH81_06955) abrB 1398547..1398825 (+) 279 WP_024424746.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Regulator
  MXH81_RS06960 (MXH81_06960) - 1398971..1400281 (+) 1311 WP_234107750.1 ATP-binding protein -
  MXH81_RS06965 (MXH81_06965) - 1400286..1401122 (+) 837 WP_234107751.1 gamma-glutamylcyclotransferase family protein -
  MXH81_RS06970 (MXH81_06970) - 1401160..1401828 (+) 669 WP_008345123.1 TrkA family potassium uptake protein -
  MXH81_RS06975 (MXH81_06975) ade 1402091..1403818 (+) 1728 WP_247721842.1 adenine deaminase -

Sequence

Protein


Download         Length: 92 a.a.        Molecular weight: 10306.01 Da        Isoelectric Point: 4.6909

>NTDB_id=678097 MXH81_RS06955 WP_024424746.1 1398547..1398825(+) (abrB) [Bacillus safensis strain ZK-1]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSMEFFIDGDKIVLKKYQPEGVCLMTGEITSENHEYGNGQITLSAEGAE
LLLKELQEALQK

Nucleotide


Download         Length: 279 bp        

>NTDB_id=678097 MXH81_RS06955 WP_024424746.1 1398547..1398825(+) (abrB) [Bacillus safensis strain ZK-1]
TTGAAATCTATCGGAGTCGTAAGAAAAGTAGACGAACTAGGGCGTATTGTGATGCCAATCGAATTGAGAAGAGCACTTGA
TATCGCTATTAAAGACAGTATGGAATTTTTTATAGATGGAGATAAAATCGTCTTGAAAAAATATCAGCCAGAGGGCGTTT
GTCTCATGACTGGTGAGATTACATCAGAGAACCATGAATATGGAAATGGTCAAATTACATTAAGCGCTGAAGGCGCAGAA
CTGCTGTTAAAAGAGCTGCAAGAAGCTCTTCAGAAGTAA

Domains

Predicted by InterproScan.

AbrB C-terminal domain (AbrB_C)

(53-88)

Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin)

(8-51)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

54.945

98.913

0.543