Detailed information NTG0677878

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: MX663_RS14830
• Genome accession: NZ_CP095736
• Coordinates: 2795455..2797851 (-)
• Length: 798 a.a.
• NCBI ID: WP_014477509.1
• Uniprot ID: A0A8E0VTN8
• Organism: Bacillus subtilis strain N4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2790455..2802851

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MX663_RS14795 (MX663_14795)	glnQ	2791528..2792256 (+)	729	WP_017696070.1	amino acid ABC transporter ATP-binding protein	-
MX663_RS14800 (MX663_14800)	glnH	2792278..2793099 (+)	822	WP_003245954.1	glutamine ABC transporter substrate-binding protein GlnH	-
MX663_RS14805 (MX663_14805)	glnM	2793160..2793810 (+)	651	WP_017696071.1	amino acid ABC transporter permease	-
MX663_RS14810 (MX663_14810)	glnP	2793827..2794483 (+)	657	WP_003229784.1	amino acid ABC transporter permease	-
MX663_RS14815 (MX663_14815)	yrzQ	2794518..2794649 (-)	132	WP_003229780.1	YrzQ family protein	-
MX663_RS14820 (MX663_14820)	-	2794671..2794862 (-)	192	WP_003225893.1	hypothetical protein	-
MX663_RS14825 (MX663_14825)	yrrD	2794874..2795398 (-)	525	WP_072692710.1	PRC-barrel domain-containing protein	-
MX663_RS14830 (MX663_14830)	recD2	2795455..2797851 (-)	2397	WP_014477509.1	ATP-dependent RecD-like DNA helicase	Machinery gene
MX663_RS14835 (MX663_14835)	yrrB	2797876..2798496 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
MX663_RS14840 (MX663_14840)	mnmA	2798582..2799697 (-)	1116	WP_046160682.1	tRNA 2-thiouridine(34) synthase MnmA	-
MX663_RS14845 (MX663_14845)	iscSA	2799728..2800867 (-)	1140	WP_247470609.1	cysteine desulfurase family protein	-
MX663_RS14850 (MX663_14850)	cymR	2800886..2801302 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
MX663_RS14855 (MX663_14855)	rarA	2801505..2802770 (+)	1266	WP_247470610.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 89182.75 Da
• Isoelectric Point: 5.0708

>NTDB_id=677878 MX663_RS14830 WP_014477509.1 2795455..2797851(-) (recD2) [Bacillus subtilis strain N4]
MQQHPDQLKLEEEPYLKGTVNTVIYHNDTNLYTVLKVKVTETSEAIEDKAVSVTGYFPALQEEETYTFYGKIVTHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADASVLYDVPRLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFGKADELGSRMGLSGNHPERVKAAILYTLETT
CLSEGHTYIETEQLIIDTQSLLNQSAREGQRITEMDAANAIIALGENKDIVIEDGRCYFPSLFYAEQNVAKRVKHIASQT
EYENQFPESEFLLALGELEERMNVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSAYKKD
EAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHQMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFNQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSVQVEEMDAELEALQKELPFSVHDANIGMEGITPFDFMKEEQQ

Nucleotide

• Length: 2397 bp

>NTDB_id=677878 MX663_RS14830 WP_014477509.1 2795455..2797851(-) (recD2) [Bacillus subtilis strain N4]
GTGCAGCAGCATCCGGATCAGCTTAAACTGGAGGAAGAGCCCTATTTAAAAGGGACAGTCAACACAGTCATCTATCATAA
TGACACCAATTTATATACGGTTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCCATTGAAGATAAAGCCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAGATCGTAACCCATCCAAAATTCGGGCTC
CAATTTCAGGCGGAGCATTTCAAAAAGGAGATTCCAACGACTAAGGAAGGCATCATTCAATATTTATCGAGTGATTTATT
CGAGGGGATCGGCAAAAAAACAGCTGAAGAAATTGTGAAAAAGCTGGGCGACAGCGCCATTAATAAAATATTGGCTGACG
CTTCAGTGCTTTATGATGTTCCAAGACTCTCAAAAAAGAAAGCAGACACGCTGGCTGGCGCATTGCAGCGGCATCAGGGA
CTGGAGCAAATCATGATTTCCTTGAATCAGTTTGGCTTTGGCCCGCAGCTGTCTATGAAAATCTATCAAGCCTATGAATC
CGAGACGCTTGAAAAGATTCAGGAAAATCCTTATCAGCTTGTGAAGGATGTAGAAGGCATCGGGTTTGGAAAAGCGGATG
AGCTGGGCAGCAGAATGGGTCTTTCGGGTAATCATCCTGAGCGGGTAAAAGCTGCTATTTTGTACACGCTTGAAACGACT
TGTCTGTCAGAGGGGCACACGTACATAGAAACGGAACAGCTGATCATTGACACCCAATCACTGTTAAACCAGTCAGCAAG
GGAAGGGCAGCGCATCACAGAAATGGATGCCGCTAACGCGATTATTGCCCTTGGAGAAAATAAAGACATTGTCATTGAAG
ATGGCCGCTGTTATTTTCCGTCGCTGTTTTACGCAGAACAAAACGTTGCAAAGCGTGTGAAACATATCGCTAGCCAAACC
GAATATGAGAACCAGTTTCCCGAATCAGAGTTTTTGCTCGCGTTGGGAGAACTGGAAGAACGGATGAACGTTCAGTATGC
CCCCAGCCAGAAGGAAGCGATTCAAAAAGCCCTTTCCTCGCCGATGCTTCTTTTAACAGGCGGCCCGGGAACAGGGAAAA
CGACGGTAATCAGAGGGATTGTCGAGCTCTACGGAGAGCTTCACGGTGTGTCACTAGACCCGTCAGCTTATAAAAAAGAT
GAAGCTTTTCCGATTGTTTTGGCCGCTCCGACAGGGAGAGCAGCAAAACGGATGAGTGAATCAACGGGACTTCCTGCAGT
TACGATACACAGGCTGCTTGGCTGGAACGGTGCTGAAGGCTTTACTCATACAGAGGATCAGCCGATCGAAGGGAAGCTGT
TAATTATCGATGAAGCCAGTATGCTTGATATATGGCTGGCGAATCATTTGTTCAAGGCGATCCCTGATCATATACAAATC
ATCATTGTCGGAGACGAAGACCAGCTGCCTTCCGTCGGTCCGGGACAAGTGCTCAGAGACCTGCTGGCATCCCAGGTGAT
TCCGACTGTGAGACTGACAGACATCTATCGTCAGGCGGAGGGGTCATCAATCGTCGAGCTTGCCCACCAGATGAAAAATG
GATTGCTGCCGAACAATTTGACTGCCCCGACAAAGGACCGTTCCTTTATTCGCTGCGGCGGGTCGCAAATCAAAGAAGTA
GTTGAGAAGGTTGTCGCCAATGCATTGAAAAAAGGCTATACAGCAAAGGACATTCAGGTCCTCGCTCCGATGTACAGAGG
AAAAGCCGGCATTAATGAATTGAATGTGATGCTGCAGGACATTTTAAATCCTCCTAAAGAAAAACGGAGAGAATTGAAGT
TCGGGGATGTTGTCTACAGAACCGGAGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAAACAATGTGTTCAACGGAGAT
ATTGGCGAAATCACGTCGATATTTTATGCAAAGGAAAATACAGAAAAAGAAGACATGGCCGTCGTTTCTTTTGACGGCAA
TGAAATGACATTTACGAAAAAAGATTTTAATCAATTTACCCATGCGTATTGCTGTTCTATTCATAAATCGCAGGGAAGTG
AATTTCCGATTGTGGTTTTGCCTGTTGTGAAAGGCTATTATAGAATGCTCAGAAGAAACCTTCTTTATACCGCGATTACA
AGAGCGAAGAAATTTCTCATTTTATGCGGGGAAGAGGAGGCGCTGGAGTGGGGCGTGAAAAATAATGATGCAACTGTCAG
ACAGACCTCCTTGAAAAACAGGCTGTCCGTACAGGTTGAGGAAATGGATGCCGAGCTTGAAGCTTTGCAAAAAGAGCTCC
CGTTCAGCGTACACGACGCCAACATTGGCATGGAAGGCATTACACCATTCGATTTTATGAAAGAAGAACAGCAATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

• AAA domain (AAA_30) (346-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	99.875	100	0.999