Detailed information NTG0067756

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: O77CONTIG1_RS08215
• Genome accession: NZ_AP017367
• Coordinates: 1927703..1928815 (-)
• Length: 370 a.a.
• NCBI ID: WP_068509663.1
• Uniprot ID: -
• Organism: Leptolyngbya sp. O-77
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1922703..1933815

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O77CONTIG1_RS08195 (O77CONTIG1_01724)	-	1923160..1923435 (-)	276	WP_068509653.1	HU family DNA-binding protein	-
O77CONTIG1_RS08200 (O77CONTIG1_01725)	-	1923784..1926000 (-)	2217	WP_286132616.1	AMIN domain-containing protein	-
O77CONTIG1_RS08205 (O77CONTIG1_01726)	-	1926089..1926889 (-)	801	WP_068509658.1	hypothetical protein	-
O77CONTIG1_RS08210 (O77CONTIG1_01727)	-	1926886..1927701 (-)	816	WP_068509660.1	PilN domain-containing protein	-
O77CONTIG1_RS08215 (O77CONTIG1_01728)	pilM	1927703..1928815 (-)	1113	WP_068509663.1	type IV pilus assembly protein PilM	Machinery gene
O77CONTIG1_RS24310	-	1929088..1929501 (+)	414	WP_156435050.1	hypothetical protein	-
O77CONTIG1_RS08220 (O77CONTIG1_01729)	-	1929613..1930911 (+)	1299	WP_068509666.1	ABC transporter substrate-binding protein	-
O77CONTIG1_RS23390	-	1931063..1931824 (+)	762	Protein_1693	IS5 family transposase	-
O77CONTIG1_RS08235 (O77CONTIG1_01732)	-	1931916..1932032 (+)	117	WP_068509668.1	photosystem II protein Y	-
O77CONTIG1_RS08240 (O77CONTIG1_01733)	-	1932245..1933093 (-)	849	WP_068509671.1	tetratricopeptide repeat protein	-
O77CONTIG1_RS25140	-	1933119..1933472 (+)	354	WP_172799607.1	hypothetical protein	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 40439.27 Da
• Isoelectric Point: 4.3324

>NTDB_id=67756 O77CONTIG1_RS08215 WP_068509663.1 1927703..1928815(-) (pilM) [Leptolyngbya sp. O-77]
MFSNVKGLFSKKTKGVGIELTPERVNVARLKRKGQGFQLTMLASAEVPEGIYQEGQILDTAAMSEIIQSVLSESKLKVKN
AATAIPGGRDTVTRIIPVPAELDDRELREMVLNQEAGLYLPFPREEADVDYQKLGFFVDEDGIEKVQVLLVATRKEVTDS
YLTTFQQAGLDVDVLEISSFALIRTIREQLRQFTPQEAAAIVDIEFENTEISIVVDGVPQFSRTVPIGTYQIQSALSRAM
NLPPSRNTELLQGMTVPIAPMDSMGTPKTPGTNPGTAAMLRVLGELADELRRSIDFYLNQGDNLEVAQLLLAGPGGAIGQ
LDEFFSQRLSLPASQVDPISALSLEVDQEIPELQRPGLGVVLGLGLREAW

Nucleotide

• Length: 1113 bp

>NTDB_id=67756 O77CONTIG1_RS08215 WP_068509663.1 1927703..1928815(-) (pilM) [Leptolyngbya sp. O-77]
GTGTTTAGCAACGTCAAGGGATTATTTTCAAAAAAGACAAAGGGTGTCGGCATTGAATTGACCCCTGAGCGCGTCAACGT
TGCCCGCCTGAAGCGGAAAGGGCAAGGCTTTCAGCTCACGATGCTGGCCTCTGCCGAGGTGCCAGAAGGGATTTACCAGG
AAGGGCAAATCCTGGACACTGCCGCGATGTCTGAAATCATTCAGTCTGTGCTGAGTGAAAGCAAGCTTAAGGTCAAGAAT
GCGGCGACCGCAATTCCGGGCGGACGAGACACCGTGACTCGCATCATTCCGGTTCCCGCCGAGCTAGACGACCGGGAACT
GCGCGAAATGGTGCTAAACCAGGAAGCTGGGCTATACTTGCCCTTTCCCCGCGAAGAAGCGGATGTAGATTACCAGAAGC
TTGGCTTTTTTGTGGATGAAGACGGCATCGAGAAGGTGCAAGTGCTGCTGGTGGCCACCCGCAAAGAAGTAACCGACTCC
TATTTGACAACGTTTCAGCAGGCAGGGCTAGACGTGGATGTCCTTGAAATCAGTAGCTTCGCGCTGATTCGCACGATCCG
AGAACAGTTGCGCCAGTTCACCCCCCAAGAGGCCGCTGCTATTGTCGATATCGAATTTGAAAATACTGAAATCTCCATCG
TGGTGGATGGAGTTCCCCAATTTTCTCGCACGGTTCCGATTGGCACTTACCAAATCCAATCTGCCTTGAGCCGCGCCATG
AACCTGCCCCCTTCACGCAACACGGAACTGCTTCAGGGGATGACGGTGCCGATCGCCCCGATGGACAGCATGGGCACTCC
CAAGACACCGGGAACCAACCCTGGCACGGCGGCGATGCTGCGAGTGCTGGGTGAACTGGCGGATGAGTTGCGCCGCTCCA
TCGACTTTTATCTGAATCAGGGCGACAACCTGGAGGTAGCGCAACTGCTGCTGGCAGGGCCGGGCGGGGCAATTGGGCAG
CTTGACGAGTTTTTCTCGCAGCGGCTTAGTCTGCCTGCCAGTCAGGTCGATCCGATTTCGGCGCTGTCGCTGGAGGTCGA
TCAGGAAATCCCAGAGTTGCAGCGTCCGGGGCTAGGGGTGGTGTTGGGCTTGGGCTTACGGGAGGCGTGGTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (285-367)

• Type IV pilus assembly protein PilM; (PilM_2) (17-242)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	65.583	99.73	0.654