Detailed information NTG0677547

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: QMZ19_RS05790
• Genome accession: NZ_CP095723
• Coordinates: 1068216..1070612 (-)
• Length: 798 a.a.
• NCBI ID: WP_185321851.1
• Uniprot ID: -
• Organism: Listeria innocua strain 2015L-6714
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1063216..1075612

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMZ19_RS05770 (MXK34_05775)	-	1063691..1064386 (-)	696	WP_010991584.1	ABC transporter ATP-binding protein	-
QMZ19_RS05775 (MXK34_05780)	-	1064395..1065897 (-)	1503	WP_185312012.1	ABC transporter permease	-
QMZ19_RS05780 (MXK34_05785)	pieR	1066065..1066751 (+)	687	WP_003762357.1	two component system response regulator PieR	-
QMZ19_RS05785 (MXK34_05790)	pieS	1066748..1068187 (+)	1440	WP_003771912.1	two component system sensor histidine kinase PieS	-
QMZ19_RS05790 (MXK34_05795)	recD2	1068216..1070612 (-)	2397	WP_185321851.1	ATP-dependent RecD-like DNA helicase	Machinery gene
QMZ19_RS05795 (MXK34_05800)	-	1070638..1071276 (-)	639	WP_247413310.1	tetratricopeptide repeat protein	-
QMZ19_RS05800 (MXK34_05805)	-	1071320..1072060 (-)	741	WP_160465818.1	alpha/beta hydrolase	-
QMZ19_RS05805 (MXK34_05810)	mnmA	1072178..1073293 (-)	1116	WP_160465819.1	tRNA 2-thiouridine(34) synthase MnmA	-
QMZ19_RS05810 (MXK34_05815)	-	1073312..1074460 (-)	1149	WP_160465820.1	cysteine desulfurase family protein	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 90105.28 Da
• Isoelectric Point: 4.8379

>NTDB_id=677547 QMZ19_RS05790 WP_185321851.1 1068216..1070612(-) (recD2) [Listeria innocua strain 2015L-6714]
MAEQESLALFNDTPDELFMKGTMLSTIFYNAENLFSVVRILVKETNANWDEKDIIVTGFFPALHEQEVYTFYGKMQEHAK
FGQQFKADRFRKEMPQSRAGLINYLSGELFKGIGKVTAENIVDTIGDDAITKILSDPSLLNTVPKLPSGTAESLLASLRE
NQGLEHVMVGLNEYGFGPQLSMKIFQVYKQNAIEVLENNPYKLIEDVKGIGFQRADELGRKLGLGGNHPERLRAGILFML
DSVCMQQGHVYMEQEVLLGEVTYLLEESEGIRIDQAILLQQIEKLAEEQKIITENTRVYMPSLYYSESGFAYHVKRMLKQ
TEYQEQFPQSEFLLALGELEERIGVHYGESQRAALEQALMSPMLVLTGGPGTGKTTVIKGIVELYAELNGVSLDPHAYKD
GATFPVLLAAPTGRAAKRMSESTGLPAMTIHRLLGMNGQEQMDDDAERLIDGRLLIVDEMSMVDIWLANQLFRALPAHMQ
VVLVGDQDQLPSVGPGQVLKDILQSEQIPTVALSDIYRQKDGSSIIEMAHYIKEGMLPADFAKNSADRSFFHCTVNQIGD
VVEQVVKNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQEIFNPNDTGRRKEVQFGEIKYRVHDKVLQLINQPEKNVFN
GDIGEIVSIIYAKENTEKQDLIVVQFDQTEVSYYRQEFNQLTHAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLLYTG
VTRSKQFLILCGEEEAFRMGVERVDENKRNTTLSERLMSEDVMLEQMTNKRILTAENITEIDPMIGMEGITPEQFMAG

Nucleotide

• Length: 2397 bp

>NTDB_id=677547 QMZ19_RS05790 WP_185321851.1 1068216..1070612(-) (recD2) [Listeria innocua strain 2015L-6714]
ATGGCTGAACAAGAATCTCTCGCCTTATTTAATGATACCCCAGACGAACTTTTCATGAAGGGGACGATGTTGTCTACCAT
TTTTTATAATGCCGAAAACCTCTTTTCTGTGGTAAGAATTCTGGTAAAAGAGACGAATGCTAATTGGGATGAAAAGGATA
TTATTGTAACTGGTTTTTTTCCAGCGCTTCATGAACAAGAAGTGTATACTTTTTACGGGAAAATGCAGGAACATGCTAAA
TTTGGTCAGCAATTTAAAGCGGACCGGTTTCGAAAAGAGATGCCTCAATCTCGCGCTGGCTTGATTAACTATCTTTCAGG
GGAACTTTTCAAGGGGATTGGTAAAGTAACGGCGGAAAACATTGTCGATACAATTGGCGATGACGCGATTACGAAAATAC
TATCTGACCCAAGTTTGCTAAACACTGTTCCTAAACTTCCTTCTGGAACAGCGGAAAGTTTGCTTGCTTCCCTTAGAGAA
AATCAAGGTCTAGAGCATGTGATGGTTGGTTTAAATGAATATGGCTTTGGTCCACAATTATCCATGAAAATTTTTCAAGT
ATATAAACAAAATGCTATTGAAGTGCTAGAAAATAATCCCTACAAATTAATTGAAGATGTTAAAGGAATTGGTTTCCAGC
GTGCCGATGAACTTGGTCGTAAGCTTGGACTTGGTGGAAACCATCCAGAACGACTTAGAGCAGGAATTTTATTTATGCTA
GATTCCGTTTGTATGCAGCAAGGGCATGTCTATATGGAACAAGAGGTTTTGCTCGGGGAAGTAACTTATCTGCTAGAAGA
AAGTGAAGGCATTAGGATTGATCAGGCTATTTTACTACAACAAATAGAAAAGCTTGCAGAAGAACAAAAAATAATTACCG
AAAATACGCGCGTCTATATGCCGTCACTTTATTATTCAGAAAGCGGTTTTGCTTATCATGTAAAACGGATGTTAAAGCAA
ACGGAGTATCAAGAACAATTTCCGCAGTCGGAGTTTTTATTAGCGCTAGGGGAACTTGAAGAACGTATTGGTGTGCATTA
CGGGGAATCTCAACGCGCGGCATTAGAACAGGCATTAATGTCACCGATGCTCGTCCTTACTGGAGGACCAGGAACAGGTA
AAACAACTGTTATTAAAGGAATTGTAGAATTATATGCCGAGTTAAATGGGGTTAGTCTTGATCCACATGCCTATAAGGAT
GGTGCAACTTTTCCAGTGTTACTTGCAGCTCCAACAGGACGCGCAGCTAAACGAATGTCTGAATCCACTGGACTTCCTGC
AATGACAATTCACCGGTTACTTGGAATGAATGGCCAAGAACAGATGGATGATGACGCAGAACGATTAATTGATGGACGTT
TGTTAATTGTGGATGAAATGTCAATGGTGGATATTTGGCTTGCGAATCAATTATTCCGCGCTTTACCTGCTCATATGCAA
GTAGTGCTCGTTGGCGACCAAGATCAGCTTCCTTCTGTTGGACCAGGTCAAGTTTTAAAAGATATTCTACAATCAGAGCA
AATTCCAACGGTTGCACTTTCAGATATTTATCGGCAAAAAGATGGTTCCTCGATTATTGAAATGGCTCATTATATCAAAG
AAGGAATGCTGCCAGCTGATTTTGCGAAAAATAGTGCAGATCGATCATTTTTCCATTGTACAGTAAACCAAATTGGCGAT
GTCGTGGAACAAGTCGTTAAAAATGCTAAAAATAAAGGTTTTCGTGCAAAAGATATTCAAGTGTTGGCCCCAATGTATCG
TGGCCCAGCCGGGATTGATATATTAAATAAAAAACTACAAGAAATCTTTAATCCAAACGATACTGGTCGACGAAAAGAAG
TACAATTTGGCGAAATCAAATACCGGGTTCACGACAAAGTACTACAACTAATCAACCAACCAGAAAAAAATGTTTTTAAC
GGTGACATTGGCGAAATCGTATCCATTATTTATGCCAAAGAAAACACGGAAAAACAAGATTTAATTGTCGTTCAATTTGA
CCAGACAGAGGTGTCTTATTATCGACAAGAATTTAATCAATTGACCCATGCGTATTGTTGTTCGATTCATAAAGCGCAGG
GTAGTGAATTTCCAATTGTTATAATGCCAATTGTGCGTAGTTATTACCGGATGTTGCGTAGAGATTTGTTATATACCGGC
GTTACAAGAAGTAAACAATTCCTAATTCTTTGCGGAGAAGAAGAAGCTTTCCGAATGGGTGTAGAACGTGTAGATGAAAA
TAAGCGGAATACAACGCTATCGGAACGTTTAATGAGTGAAGATGTGATGCTCGAACAAATGACAAATAAACGAATATTAA
CTGCCGAAAACATTACGGAGATTGATCCGATGATTGGGATGGAAGGAATTACTCCAGAACAATTTATGGCAGGATGA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (347-554)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (595-666)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (683-731)

• Helix-hairpin-helix containing domain (HHH_RecD2) (160-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	57.107	98.747	0.564