Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OIU91_RS19145 Genome accession   NZ_CP109455
Coordinates   4247239..4248363 (+) Length   374 a.a.
NCBI ID   WP_329148030.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01456     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4242239..4253363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIU91_RS19130 (OIU91_19130) - 4242767..4243627 (+) 861 WP_329148025.1 hypothetical protein -
  OIU91_RS19135 (OIU91_19135) - 4243674..4245461 (-) 1788 WP_329148026.1 sigma-70 family RNA polymerase sigma factor -
  OIU91_RS19140 (OIU91_19140) radA/sms 4245702..4247114 (+) 1413 WP_329148028.1 DNA repair protein RadA Machinery gene
  OIU91_RS19145 (OIU91_19145) disA 4247239..4248363 (+) 1125 WP_329148030.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OIU91_RS19150 (OIU91_19150) - 4248400..4249383 (-) 984 WP_329148032.1 SDR family oxidoreductase -
  OIU91_RS19155 (OIU91_19155) - 4249521..4250321 (-) 801 WP_329148034.1 hypothetical protein -
  OIU91_RS19160 (OIU91_19160) - 4250573..4251091 (-) 519 WP_329148036.1 pyridoxamine 5'-phosphate oxidase family protein -
  OIU91_RS19165 (OIU91_19165) - 4251284..4252243 (+) 960 WP_329148037.1 A/G-specific adenine glycosylase -
  OIU91_RS19170 (OIU91_19170) - 4252680..4253237 (+) 558 WP_329155168.1 SigE family RNA polymerase sigma factor -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40332.16 Da        Isoelectric Point: 5.0196

>NTDB_id=676741 OIU91_RS19145 WP_329148030.1 4247239..4248363(+) (disA) [Streptomyces sp. NBC_01456]
MAANDRASTPGRAGGSSGTESLMRATLSAVAPGRALRDGLERILRGNTGGLIVLGFDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALVLDKDITKILRAGVQLVPDASIPTEETGTRHRTAQRVSIQAGFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALAELDALSHTELLELPTVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGT
VIERLVDHFGGLQKLLAASVDDLQTVDGVGETRARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=676741 OIU91_RS19145 WP_329148030.1 4247239..4248363(+) (disA) [Streptomyces sp. NBC_01456]
GTGGCAGCCAACGACCGGGCATCGACTCCCGGCAGGGCCGGTGGCAGTTCCGGCACCGAGAGCCTGATGCGCGCCACGCT
GAGCGCCGTCGCGCCCGGCAGGGCCCTGCGCGACGGTCTGGAGCGCATCCTCCGCGGCAATACGGGCGGACTGATCGTGC
TGGGCTTCGACAAGACCGTCGAATCCATGTGTACCGGCGGATTCGTGCTGGACGTCGAGTTCACCGCCACGCGGCTGCGT
GAGCTGTGCAAGCTCGACGGTGCGCTGGTCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTCCC
GGACGCCTCCATCCCGACGGAGGAGACCGGCACCCGTCACCGCACCGCCCAGCGCGTCTCGATCCAGGCCGGTTTCCCGG
TCGTCTCGGTCAGCCAGTCGATGCGCCTGATCGCCCTCTACGTGGACGGCGAACGCCGCGTCCTGGAGGAATCGGCCGCG
ATCCTCTCCCGTGCCAACCAGGCGCTGGCCACCCTGGAGCGCTACAAGCTCCGGCTGGACGAGGTCGCCGGCACCCTCTC
CGCCCTGGAGATCGAGGACTTGGTCACGGTCCGCGATGTCTCCGCGGTCGCCCAGCGCCTGGAGATGGTCCGCCGGATCG
CCACCGAGATCGCCGAGTACGTCGTCGAGCTCGGCACCGACGGCCGGCTGCTCGCCCTCCAGCTGGAGGAACTGATCGCC
GGCGTGGAGCCGGAGCGGGAGCTGGTCGTGCGCGACTATGTCCCCGAGCCGACCGCCAAGCGCTCGCGCACGGTCGCCGA
GGCGCTCGCCGAGCTGGACGCGCTCAGCCACACCGAGCTGCTCGAACTCCCCACCGTGGCCCGCGCGCTGGGCTACAGCG
GCTCGCCCGAGACGCTGGACTCCGCGGTCTCGCCGCGCGGCTTCCGCCTGCTGGCGAAGGTGCCCCGGCTGCCCGGCACG
GTCATCGAGCGCCTCGTCGACCACTTCGGCGGTCTGCAAAAGCTCCTCGCGGCCAGCGTCGACGACCTCCAGACCGTGGA
CGGCGTCGGCGAGACCCGCGCCCGCTCGGTCCGCGAGGGCCTGTCGCGCCTTGCCGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.857

93.583

0.42