Detailed information NTG0676240

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OG318_RS22965
• Genome accession: NZ_CP109438
• Coordinates: 5040475..5041494 (-)
• Length: 339 a.a.
• NCBI ID: WP_329365303.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01483
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5035475..5046494

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG318_RS22950 (OG318_22935)	-	5037100..5037972 (-)	873	WP_329365298.1	carbohydrate ABC transporter permease	-
OG318_RS22955 (OG318_22940)	-	5037969..5038988 (-)	1020	WP_329365300.1	sugar ABC transporter permease	-
OG318_RS22960 (OG318_22945)	-	5038998..5040305 (-)	1308	WP_329365301.1	extracellular solute-binding protein	-
OG318_RS22965 (OG318_22950)	cytR	5040475..5041494 (-)	1020	WP_329365303.1	LacI family DNA-binding transcriptional regulator	Regulator
OG318_RS22970 (OG318_22955)	-	5041584..5041778 (-)	195	WP_329365305.1	DUF397 domain-containing protein	-
OG318_RS22975 (OG318_22960)	-	5041775..5042596 (-)	822	WP_329365307.1	helix-turn-helix transcriptional regulator	-
OG318_RS22980 (OG318_22965)	-	5042900..5043157 (-)	258	WP_329365311.1	hypothetical protein	-
OG318_RS22985 (OG318_22970)	tsaD	5043328..5044425 (-)	1098	WP_329365313.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
OG318_RS22990 (OG318_22975)	rimI	5044418..5044924 (-)	507	WP_329373678.1	ribosomal protein S18-alanine N-acetyltransferase	-
OG318_RS22995 (OG318_22980)	tsaB	5044942..5045613 (-)	672	WP_329365316.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
OG318_RS23000 (OG318_22985)	-	5045736..5046290 (+)	555	WP_329365318.1	hypothetical protein	-

Sequence

Protein

• Length: 339 a.a.
• Molecular weight: 36136.29 Da
• Isoelectric Point: 6.3086

>NTDB_id=676240 OG318_RS22965 WP_329365303.1 5040475..5041494(-) (cytR) [Streptomyces sp. NBC_01483]
MARESIRNKVTITEIARQAGVSVPTVSRVVNGRSDVSPETRARIEDLLRHHGYQRKPNAPGDRAALIDLVFNDLDSPWAV
EIIRGVEEVAHASGVGTVVSAIHGASGSARQWMTNLRARASDGVILVTSVLEPRLHDELRRLGVPLVVVDPAGSPALDMP
TVGATNWAGGMAATEHLLGLGHRRIGFIAGPPRLLCSRARLDGYRAALEGAGIAVDDALIVPGDFYHSAGFDGCNTLLDL
EEPPTALFASSDQMALGAIEALRRRGLRVPEDLSVVGFDDLPEVRWSAPPLTTVRQPLADMGKLATRTVLRLALGEEPAS
PRIELATELVVRASTAPLA

Nucleotide

• Length: 1020 bp

>NTDB_id=676240 OG318_RS22965 WP_329365303.1 5040475..5041494(-) (cytR) [Streptomyces sp. NBC_01483]
GTGGCCCGGGAGAGCATCAGGAACAAGGTGACGATCACCGAGATCGCCCGGCAGGCCGGGGTCTCGGTGCCCACCGTGTC
GCGTGTCGTCAACGGCCGCTCCGACGTGTCGCCGGAGACCCGGGCCCGGATCGAGGACCTGCTGCGCCACCACGGCTACC
AGCGGAAGCCGAACGCTCCGGGCGACCGGGCCGCCCTGATCGACCTGGTCTTCAACGATCTCGACAGCCCGTGGGCCGTG
GAGATCATCCGCGGGGTCGAGGAGGTCGCGCACGCCTCCGGTGTGGGCACGGTCGTGTCGGCCATTCATGGGGCCTCGGG
GTCGGCCCGGCAGTGGATGACCAATCTGAGGGCGCGCGCCTCGGACGGCGTCATCCTGGTGACGTCCGTCCTGGAACCTC
GGCTGCATGACGAGCTGCGGCGGCTCGGTGTGCCGCTCGTCGTGGTCGATCCGGCGGGCTCGCCTGCCCTCGACATGCCG
ACCGTCGGTGCCACCAACTGGGCCGGTGGCATGGCCGCGACGGAGCACCTGCTCGGCCTCGGGCACCGGCGGATCGGGTT
CATCGCGGGGCCGCCCCGGCTGCTGTGCTCACGGGCCCGGCTCGACGGCTACCGGGCGGCGCTGGAAGGCGCGGGCATCG
CCGTCGACGACGCGCTGATCGTGCCCGGCGACTTCTACCACTCCGCCGGCTTCGACGGCTGCAACACCCTGCTCGACCTG
GAGGAGCCGCCGACCGCGCTGTTCGCCTCCAGTGATCAGATGGCGCTGGGGGCGATCGAGGCACTGCGGCGCCGGGGCCT
CAGGGTGCCGGAGGACCTGAGCGTCGTGGGCTTCGACGATCTGCCCGAAGTGCGCTGGTCCGCCCCGCCGTTGACGACCG
TGCGCCAGCCCTTGGCGGACATGGGCAAACTGGCCACGCGCACGGTGCTGCGGCTCGCGCTGGGCGAGGAGCCCGCCTCT
CCCCGGATCGAGCTCGCCACCGAGTTGGTGGTGCGGGCCAGTACGGCCCCGCTCGCCTGA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-54)

• Periplasmic binding protein-like domain (Peripla_BP_3) (174-335)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	35.86	100	0.363