Detailed information NTG0675433

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: MUA56_RS06150
• Genome accession: NZ_CP095102
• Coordinates: 1325878..1328292 (+)
• Length: 804 a.a.
• NCBI ID: WP_262550279.1
• Uniprot ID: -
• Organism: Staphylococcus simulans strain IVB6188
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1320878..1333292

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUA56_RS06125 (MUA56_06120)	-	1321360..1321566 (+)	207	WP_023016061.1	CsbD family protein	-
MUA56_RS06130 (MUA56_06125)	-	1321661..1322665 (-)	1005	WP_057510444.1	LLM class flavin-dependent oxidoreductase	-
MUA56_RS06135 (MUA56_06130)	-	1322848..1323990 (+)	1143	WP_023016059.1	cysteine desulfurase family protein	-
MUA56_RS06140 (MUA56_06135)	mnmA	1323993..1325105 (+)	1113	WP_002481106.1	tRNA 2-thiouridine(34) synthase MnmA	-
MUA56_RS06145 (MUA56_06140)	-	1325207..1325875 (+)	669	WP_002481105.1	tetratricopeptide repeat protein	-
MUA56_RS06150 (MUA56_06145)	recD2	1325878..1328292 (+)	2415	WP_262550279.1	ATP-dependent RecD-like DNA helicase	Machinery gene
MUA56_RS06155 (MUA56_06150)	alaS	1328603..1331233 (+)	2631	WP_262550281.1	alanine--tRNA ligase	-
MUA56_RS06160 (MUA56_06155)	-	1331302..1331565 (+)	264	WP_023015119.1	IreB family regulatory phosphoprotein	-
MUA56_RS06165 (MUA56_06160)	ruvX	1331569..1331994 (+)	426	WP_002481101.1	Holliday junction resolvase RuvX	-
MUA56_RS06170 (MUA56_06165)	-	1332019..1332330 (+)	312	WP_002481100.1	DUF1292 domain-containing protein	-
MUA56_RS06175 (MUA56_06170)	-	1332573..1333214 (+)	642	WP_156666496.1	O-methyltransferase	-

Sequence

Protein

• Length: 804 a.a.
• Molecular weight: 90571.95 Da
• Isoelectric Point: 4.5315

>NTDB_id=675433 MUA56_RS06150 WP_262550279.1 1325878..1328292(+) (recD2) [Staphylococcus simulans strain IVB6188]
MENPTLFDYSMVKGTVEAILFQNKDNFYTVLKVDPIETNEDFDNMPTIVGFFPEIAEGDVYTFKGQAVTHPRYGKQLKAE
TFEKEVPQTKDAIISYLSSDLFKGVGKKTAENIVNTLGENTINKILDDRSVLEDVPNLSKKKQSQIADQIYSNQEVEKIM
IRLHDLGFGPKLAMSIYQVYQSDTLQTIEKNPYDLVYDVRGVGFHKADTLAKNLGIEYNAPERLKAGLLYTIEEECIKQG
HTFLPKDYVLETSLEMLSKGYDQTIDASMLEKMILELTEESKLVEADETLSIPSLYYSEVKSVQNLYRIASHQAKLENIE
QSDLQINIGEIEEMNGVNYASSQKEALETAINSKVMLLTGGPGTGKTTVIKGIVELYAETHGLSLSYDDYQEDDYPIALA
APTGRAAKRLQESTGLEAMTIHRLIGWSQDTKPEDVLENEITAKLIIIDEMSMVDTWLFHQFLNAVPIDAQIILVGDEDQ
LPSVGPGQVFKDLIDAKVIPRVNLTEVYRQQDGSSIIELAHKMKLGQPIDITERFHDRSFIPCTAEQIPDVVNKVVSSAV
KKGYDMSDIQVLAPMYRGSAGIKRLNKVLQDILNPKAEDAREIEFGEAVFRKGDKVLQLVNRPNDNIFNGDIGVIVGIFW
ARENELNKDILVVDFEGNEITFTKQDMMELTHAYCTSIHKAQGSEFPIVIMPIVKQYYRMLQRPIIYTGLTRAKQSLVFL
GDSQAFDIGMKTHGQVRMTRLAQLLRDYFGHESETNEEQADEQTNDKTTSAPAQQLVELTEATIYEIDPMIGMGKVTPYT
FNHE

Nucleotide

• Length: 2415 bp

>NTDB_id=675433 MUA56_RS06150 WP_262550279.1 1325878..1328292(+) (recD2) [Staphylococcus simulans strain IVB6188]
TTGGAGAACCCTACATTGTTTGACTATTCGATGGTCAAAGGAACAGTAGAAGCAATCTTATTTCAAAATAAAGATAATTT
CTATACCGTATTAAAAGTAGATCCGATTGAAACCAATGAAGATTTTGATAATATGCCTACAATTGTGGGGTTCTTTCCTG
AAATTGCTGAAGGCGATGTTTATACCTTCAAAGGTCAAGCTGTGACACACCCTAGATACGGCAAACAATTAAAAGCTGAA
ACTTTCGAAAAAGAAGTACCGCAAACAAAAGATGCGATTATCAGTTACTTATCAAGTGATTTATTTAAAGGTGTCGGTAA
GAAAACGGCTGAAAATATCGTAAATACACTTGGTGAAAATACCATCAATAAAATTTTAGATGATCGTTCAGTCTTAGAAG
ATGTACCGAATTTATCTAAAAAGAAACAAAGTCAAATCGCAGATCAAATCTACAGTAATCAAGAAGTAGAAAAAATTATG
ATCAGACTTCATGATTTAGGCTTCGGTCCGAAATTAGCGATGAGCATCTATCAAGTTTATCAAAGTGACACCTTACAAAC
GATAGAGAAAAATCCATATGATCTTGTCTATGATGTACGTGGTGTCGGTTTCCATAAAGCAGATACTTTAGCTAAGAATT
TAGGCATAGAATATAATGCCCCTGAACGCTTAAAAGCAGGTCTGCTTTATACGATAGAAGAAGAGTGTATTAAACAAGGT
CATACATTTTTACCTAAAGATTATGTATTAGAAACTTCGTTAGAGATGTTAAGCAAGGGATATGACCAAACGATAGATGC
CAGTATGTTAGAAAAAATGATACTTGAATTGACAGAAGAAAGTAAGTTGGTGGAAGCGGATGAAACACTTTCTATCCCAA
GCTTATATTATTCAGAAGTCAAAAGTGTGCAGAACCTGTATCGTATTGCGTCACATCAAGCTAAATTAGAGAATATTGAA
CAATCTGACTTACAAATCAATATTGGTGAAATCGAGGAAATGAATGGAGTCAACTACGCATCTTCTCAAAAAGAAGCACT
TGAAACAGCGATTAATTCAAAAGTCATGCTGCTGACAGGTGGTCCAGGTACCGGTAAAACAACGGTTATCAAAGGCATCG
TTGAACTCTATGCGGAAACGCATGGTTTATCCTTATCCTATGACGATTACCAAGAAGATGATTATCCGATAGCGCTTGCT
GCACCTACAGGACGTGCAGCCAAACGTTTACAAGAATCGACTGGACTTGAAGCAATGACTATCCACCGTTTAATCGGCTG
GAGTCAAGATACCAAGCCTGAAGATGTCTTAGAAAATGAAATTACTGCTAAGCTCATCATTATTGATGAAATGTCAATGG
TAGATACATGGTTGTTTCATCAGTTCTTGAATGCAGTACCGATTGATGCACAAATCATTTTAGTCGGAGATGAAGACCAA
TTACCATCAGTCGGCCCAGGACAAGTGTTTAAAGATTTAATTGATGCGAAAGTCATTCCACGTGTTAATTTAACTGAAGT
TTACCGTCAACAAGATGGTTCTAGTATCATTGAACTCGCACATAAAATGAAATTAGGTCAGCCGATAGACATTACTGAGC
GATTCCACGATCGCAGCTTTATTCCTTGTACAGCTGAACAAATACCAGATGTAGTCAATAAAGTGGTGAGTTCTGCTGTT
AAAAAAGGCTACGATATGAGCGATATTCAAGTCTTGGCTCCGATGTATCGCGGCAGTGCCGGCATTAAGCGTTTAAATAA
AGTATTACAAGATATCTTGAATCCTAAAGCTGAAGATGCAAGAGAGATTGAGTTCGGAGAAGCGGTCTTTAGAAAGGGCG
ACAAAGTCTTACAACTTGTGAATCGTCCTAATGATAATATTTTCAATGGCGATATCGGTGTGATTGTCGGTATCTTCTGG
GCACGTGAAAACGAATTAAATAAAGATATACTTGTCGTCGATTTTGAAGGCAATGAAATTACATTTACCAAACAAGATAT
GATGGAGTTAACACATGCTTATTGCACTTCCATTCATAAAGCACAAGGTTCAGAGTTTCCAATTGTTATTATGCCGATTG
TAAAACAATATTATCGCATGTTGCAGCGTCCGATTATCTATACAGGACTTACACGTGCCAAACAATCTTTAGTTTTTCTT
GGTGACAGCCAAGCCTTTGACATCGGTATGAAGACCCATGGCCAAGTTCGTATGACGAGACTCGCACAATTGCTCAGAGA
TTACTTCGGTCATGAGAGTGAAACAAATGAGGAACAAGCAGATGAACAAACAAATGACAAAACAACCTCAGCACCTGCAC
AACAACTCGTAGAATTAACAGAAGCAACGATTTATGAAATTGACCCGATGATTGGTATGGGTAAGGTCACACCTTATACT
TTTAATCATGAATAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (339-544)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-719)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	52.568	92.04	0.484