Detailed information NTG0675115

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: MP619_RS10270
• Genome accession: NZ_CP095081
• Coordinates: 2059001..2059933 (-)
• Length: 310 a.a.
• NCBI ID: WP_268227767.1
• Uniprot ID: A0AAE9ZZ09
• Organism: Streptococcus dysgalactiae strain WJ001
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2054001..2064933

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MP619_RS10245 (MP619_10215)	tsaD	2054489..2055505 (-)	1017	WP_129556266.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
MP619_RS10250 (MP619_10220)	rimI	2055495..2055920 (-)	426	WP_115245668.1	ribosomal protein S18-alanine N-acetyltransferase	-
MP619_RS10255 (MP619_10225)	tsaB	2055922..2056620 (-)	699	WP_129556267.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
MP619_RS10260 (MP619_10230)	-	2056906..2057136 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
MP619_RS10265 (MP619_10235)	rnjA	2057138..2058820 (+)	1683	WP_003056700.1	ribonuclease J1	-
MP619_RS10270 (MP619_10240)	amiF	2059001..2059933 (-)	933	WP_268227767.1	ATP-binding cassette domain-containing protein	Regulator
MP619_RS10275 (MP619_10245)	oppD	2059926..2060978 (-)	1053	WP_129556269.1	ABC transporter ATP-binding protein	Regulator
MP619_RS10280 (MP619_10250)	-	2060990..2062021 (-)	1032	WP_129556270.1	ABC transporter permease	-
MP619_RS10285 (MP619_10255)	-	2062031..2062945 (-)	915	WP_003052794.1	ABC transporter permease	-
MP619_RS10290 (MP619_10260)	-	2063213..2064868 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35240.09 Da
• Isoelectric Point: 6.6707

>NTDB_id=675115 MP619_RS10270 WP_268227767.1 2059001..2059933(-) (amiF) [Streptococcus dysgalactiae strain WJ001]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVNFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDINGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEAEQYRREYR

Nucleotide

• Length: 933 bp

>NTDB_id=675115 MP619_RS10270 WP_268227767.1 2059001..2059933(-) (amiF) [Streptococcus dysgalactiae strain WJ001]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAACTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCTGGCTCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTAATGGACTAACAGCTTCAAAAGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAATAAGGACCATTTGACACGTTACCCTCATGAATTTTCTGGTGGGCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTGAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
GATTCAGGCCCAGGTGGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGATCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAAATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTGCTCTCGGCTATTCCTGAGCCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTGTATGATCCAAGTCAAGAATTGGACGGTCAAGAGCGTCAGATGCATGAGATTACTCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGAGCAATATCGACGGGAGTATCGTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.754	98.387	0.539
amiF	Streptococcus thermophilus LMG 18311	54.426	98.387	0.535
amiF	Streptococcus salivarius strain HSISS4	54.098	98.387	0.532