Detailed information NTG0674405

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: MUB28_RS03980
• Genome accession: NZ_CP094945
• Coordinates: 752086..752967 (+)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain VHProbi R08
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 747086..757967

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUB28_RS03950 (MUB28_03950)	-	748096..748548 (+)	453	WP_050983521.1	hypothetical protein	-
MUB28_RS03955 (MUB28_03955)	-	748538..749041 (+)	504	WP_224102963.1	DUF4832 domain-containing protein	-
MUB28_RS03960 (MUB28_03960)	galE	749056..750069 (+)	1014	WP_014727437.1	UDP-glucose 4-epimerase GalE	-
MUB28_RS03965 (MUB28_03965)	-	750257..750493 (+)	237	WP_002946959.1	DUF1146 family protein	-
MUB28_RS03970 (MUB28_03970)	murA	750563..751834 (+)	1272	WP_014608377.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
MUB28_RS03975 (MUB28_03975)	-	751836..752024 (+)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
MUB28_RS03980 (MUB28_03980)	endA	752086..752967 (+)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
MUB28_RS03985 (MUB28_03985)	-	753039..753689 (-)	651	WP_014608375.1	amino acid ABC transporter permease	-
MUB28_RS03990 (MUB28_03990)	-	753701..754399 (-)	699	WP_014608374.1	amino acid ABC transporter permease	-
MUB28_RS03995 (MUB28_03995)	-	754417..755250 (-)	834	WP_014608373.1	transporter substrate-binding domain-containing protein	-
MUB28_RS04000 (MUB28_04000)	-	755262..756029 (-)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
MUB28_RS04005 (MUB28_04005)	vicR	756556..757263 (+)	708	WP_011681206.1	response regulator YycF	Regulator

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=674405 MUB28_RS03980 WP_011681210.1 752086..752967(+) (endA) [Streptococcus thermophilus strain VHProbi R08]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=674405 MUB28_RS03980 WP_011681210.1 752086..752967(+) (endA) [Streptococcus thermophilus strain VHProbi R08]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTAGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594