Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   BTUAT1_RS14680 Genome accession   NZ_AP014928
Coordinates   2863027..2863668 (-) Length   213 a.a.
NCBI ID   WP_060832600.1    Uniprot ID   -
Organism   Bacillus altitudinis strain TUAT1     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2858027..2868668
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTUAT1_RS14645 (BTUAT1_29060) - 2859155..2859586 (+) 432 WP_060832599.1 Na(+)/H(+) antiporter subunit B -
  BTUAT1_RS14650 (BTUAT1_29070) - 2859586..2859927 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  BTUAT1_RS14655 (BTUAT1_29080) - 2859920..2861398 (+) 1479 WP_017358945.1 Na+/H+ antiporter subunit D -
  BTUAT1_RS14660 (BTUAT1_29090) - 2861405..2861884 (+) 480 WP_017358944.1 Na+/H+ antiporter subunit E -
  BTUAT1_RS14665 (BTUAT1_29100) - 2861884..2862165 (+) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  BTUAT1_RS14670 (BTUAT1_29110) mnhG 2862149..2862523 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  BTUAT1_RS14675 (BTUAT1_29120) - 2862614..2863003 (-) 390 WP_017358943.1 hotdog fold thioesterase -
  BTUAT1_RS14680 (BTUAT1_29130) comA 2863027..2863668 (-) 642 WP_060832600.1 response regulator transcription factor Regulator
  BTUAT1_RS14685 (BTUAT1_29140) comP 2863749..2866061 (-) 2313 WP_035701206.1 ATP-binding protein Regulator
  BTUAT1_RS19350 (BTUAT1_29150) comX 2866102..2866272 (-) 171 WP_074041927.1 competence pheromone ComX -
  BTUAT1_RS14690 (BTUAT1_29160) - 2866269..2867183 (-) 915 WP_060832601.1 polyprenyl synthetase family protein -
  BTUAT1_RS14695 (BTUAT1_29170) degQ 2867335..2867475 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  BTUAT1_RS14700 (BTUAT1_29180) - 2867981..2868334 (+) 354 WP_019744042.1 hypothetical protein -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24269.69 Da        Isoelectric Point: 4.5688

>NTDB_id=67402 BTUAT1_RS14680 WP_060832600.1 2863027..2863668(-) (comA) [Bacillus altitudinis strain TUAT1]
MKKILVIDDHPAVMEWTKSILESDQQLSVDCLSPDAEGAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILETNQQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLKKLISQQQEKPEQAQQTDHELLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSESVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=67402 BTUAT1_RS14680 WP_060832600.1 2863027..2863668(-) (comA) [Bacillus altitudinis strain TUAT1]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAATGGACAAAAAGCATATTAGAATCAGATCAGCAGCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGGCGCCTTTTTAAAGACGCATGACTTTTCCATCTATGATGTGATCTTGA
TGGATTTAAATCTCGGGGATATCAATGGAATGGACATTGCCAAACAAATTCTAGAAACGAATCAACAAGTGAAAATTATC
ATTTATACAGGATATGAAGTAGATGATTATTTCGAAGAGGCCATTCGAGCTGGATTGCATGGTGCAATAAGTAAAACAGA
GACAAAAGACAAAATCATTGAATACATACACCGCACATTGCAAGGAGAAGTTGTCATTCAGCTATCCTATTTAAAGAAAT
TAATTTCACAGCAACAAGAGAAGCCAGAACAGGCGCAGCAGACGGATCATGAGCTGTTAACAGAGCGTGAATGCTTAATC
TTAAGAGAAGTGGAAAAAGGGTACACAAACCAAGAGATCGCCGATGTGCTTCATTTGAGCAAACGCTCGATTGAATACAG
TTTGACCTCCATCTTTAATAAGCTGAATGTTGGATCTCGAACAGAAGCGGTGTTAATTGCAAAATCGGAAAGTGTCCTGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(152-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.028

100

0.714

Multiple sequence alignment