Detailed information NTG0067395

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: BTUAT1_RS12140
• Genome accession: NZ_AP014928
• Coordinates: 2389584..2391968 (-)
• Length: 794 a.a.
• NCBI ID: WP_060832472.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain TUAT1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2384584..2396968

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BTUAT1_RS12110 (BTUAT1_24090)	-	2385488..2386216 (+)	729	WP_007501456.1	amino acid ABC transporter ATP-binding protein	-
BTUAT1_RS12115 (BTUAT1_24100)	-	2386231..2387040 (+)	810	WP_017367698.1	transporter substrate-binding domain-containing protein	-
BTUAT1_RS12120 (BTUAT1_24110)	-	2387121..2387774 (+)	654	WP_007501460.1	amino acid ABC transporter permease	-
BTUAT1_RS12125 (BTUAT1_24120)	-	2387790..2388440 (+)	651	WP_017367699.1	amino acid ABC transporter permease	-
BTUAT1_RS19295 (BTUAT1_24130)	-	2388479..2388610 (-)	132	WP_008342695.1	YrzQ family protein	-
BTUAT1_RS12130 (BTUAT1_24140)	-	2388631..2388822 (-)	192	WP_003216308.1	hypothetical protein	-
BTUAT1_RS12135 (BTUAT1_24150)	-	2388836..2389297 (-)	462	WP_046344105.1	PRC-barrel domain-containing protein	-
BTUAT1_RS12140 (BTUAT1_24160)	recD2	2389584..2391968 (-)	2385	WP_060832472.1	ATP-dependent RecD-like DNA helicase	Machinery gene
BTUAT1_RS12145 (BTUAT1_24170)	-	2391988..2392641 (-)	654	WP_008342707.1	tetratricopeptide repeat protein	-
BTUAT1_RS12150 (BTUAT1_24180)	mnmA	2392703..2393821 (-)	1119	WP_008342709.1	tRNA 2-thiouridine(34) synthase MnmA	-
BTUAT1_RS12155 (BTUAT1_24190)	-	2393917..2395059 (-)	1143	WP_025207703.1	cysteine desulfurase family protein	-
BTUAT1_RS12160 (BTUAT1_24200)	cymR	2395078..2395497 (-)	420	WP_008342713.1	cysteine metabolism transcriptional regulator CymR	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88930.31 Da
• Isoelectric Point: 5.0580

>NTDB_id=67395 BTUAT1_RS12140 WP_060832472.1 2389584..2391968(-) (recD2) [Bacillus altitudinis strain TUAT1]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHQIMRDPSVLYNVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQAYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIIETRKLLNQTGNDYKVTEMDVANQIIALGEGKDMIIEDDRCYHPSLFYAEQSVAKRIQKIVAQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPGDYKKDE
AFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEDQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAIPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSSDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQQILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLTETEEVMDAELAALQKELPFSVHDANIGMEGITPFDFMQE

Nucleotide

• Length: 2385 bp

>NTDB_id=67395 BTUAT1_RS12140 WP_060832472.1 2389584..2391968(-) (recD2) [Bacillus altitudinis strain TUAT1]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAAGACGAACCGTTTTTAAAAGGGACGGTTCAAGCTGTTATTTTCCATAA
CGAAAGTAATTTATACTCGGTGTTAAAAGTAAAAGTCATTGAAACATCAGAGAATTTAGAGGAAAAAACAGCATCTGTCA
CAGGGTACTTCCCAGCGCTGCATGAGGAGGAAACCTACACCTTCTATGGCAAGGTCACAAGTCATCCGAAGTTTGGTGAG
CAGTTTCAAGCCACCCATTTTCAAAAGGAAGTCCCTACAACAAAGCAAGGCATCATTCATTATCTCTCTAGTGACTTGTT
TGAAGGGATTGGGAAAAAGACGGCGGAAGAAATCGTCGGCAAGCTTGGCAATCAGACGCTTCATCAAATTATGCGTGATC
CGTCTGTGTTGTATAACGTCCCTCGCCTGTCAAAAAAGAAGGCAGATAAGCTGGCTGCCGCACTTCAAGAGCATCAAGGG
CTTGAGCAAATCATGATCAGCCTGAATCAATATGGCTTTGGTCCTCAGCTTAGTATGAAGATTTACCAAGCGTACGAGAG
TGAAACGTTGCAGAAAATTGAAGAAAACCCTTATCAGCTCGTCAAAGACGTCGAGGGGATTGGATTTATTAAAGCAGATG
AACTCGGCGCTAGAACAGGGATATCTGGAAATGATCCAGAACGCATTCGTGCAGCCCTTTTGTATACCGTTGAGACAGCA
AGCCTGCAAGACGGTCATACGTACATACAAACGAAAGATCTGATCATCGAAACCCGTAAATTGCTGAATCAAACCGGCAA
TGACTACAAAGTGACTGAAATGGACGTTGCCAATCAGATCATTGCACTTGGTGAAGGGAAAGACATGATCATTGAAGATG
ATCGCTGTTATCATCCGTCGCTCTTTTATGCGGAGCAAAGTGTGGCAAAACGTATTCAAAAAATTGTCGCTCAAACGGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTGCTTGCACTCGGTGAACTGGAGGAGCGGCTAGGTGTCCAGTATGCACC
GACTCAAAAAGAAGCCATTCAAAAGGCACTCATGTCCCCGATGCTGCTCTTAACAGGCGGACCGGGTACAGGGAAAACGA
CGGTCATTAAAGGGATTGTCGAGCTTTACAGCGATCTTCACGGCGTATCTCTTGACCCGGGTGATTATAAAAAAGATGAA
GCATTTCCGTTCGTGCTTGCCGCACCAACTGGACGTGCTGCGAAACGAATGACAGAATCCACTGGACTGCCTGCTGTGAC
CATTCACCGGCTGCTAGGCTGGAATGGATCAGAAGGCTTCTCACATGATGAAGACCAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCGAGTATGCTGGATATTTGGCTGGCGAACCATTTGTTTAAGGCGATCCCAGATCATATTCAAGTCATT
ATGGTTGGAGACGAACATCAACTTCCATCTGTCGGGCCTGGTCAAGTGTTAAGAGACCTGCTTGCGTCACAAGCTATACC
GGCAGTTACATTAACTGATATTTACCGGCAGGCAGACGGTTCAACAATTGTTGAGCTTGCGCACGATATGAAAAATGGTG
TTTTGCCAAAGGATATTACTGCACGCTCGAAGGATCGATCCTTTATTCAATGCTCTAGTGACCAAATGAAAGAAGTCATC
GAGAAAGTGGTCAGCAATGCTGCTCAAAAGGGTTATTCAGCAAAGGACATTCAAGTACTTGCCCCGATGTATAAAGGAAA
AGCAGGCATTAATGAACTGAATAAAATGCTCCAGCAAATTTTGAATCCTAAAAAGCCAAAAGGAAGAGAAATTCCATTTG
GTGATGTCGTCTACCGGACAGGTGATAAGGTACTTCAGCTTGTCAATCAGCCCGAGAATAACATTTTTAATGGAGATATT
GGAGAAATTGTCTCGATCTTTTATGCGAAAGAAAACACGGAAAAAGAAGATATGGCAGTCATCTCCTTTGATGGAAATGA
AATCACGTTTACGAAAAAAGATTTTCATCAATTTACACACGCTTATTGTTGCTCGATTCATAAATCCCAGGGCAGTGAAT
TCCCAATCGTGGTGCTGCCAGTCGTGAGAAGTTATTATCGAATGCTTCGAAGAAATTTGCTTTACACGGCCATTACACGA
AGTAAAAAGTTTTTAATTTTGTGCGGTGAGGAATCAGCATTAGAGTGGGGCGTGAAAAATAATGAAGACTCCCTCAGACA
AACGTCTTTAACTATGCGTCTTACTGAAACGGAAGAAGTCATGGATGCTGAGCTAGCAGCCCTCCAAAAAGAACTTCCTT
TCAGCGTACACGATGCCAATATTGGCATGGAGGGAATCACCCCGTTTGATTTTATGCAAGAGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80.252	100	0.804