Detailed information NTG0673137

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: MUA52_RS06075
• Genome accession: NZ_CP094814
• Coordinates: 1235180..1237552 (+)
• Length: 790 a.a.
• NCBI ID: WP_262619412.1
• Uniprot ID: -
• Organism: Staphylococcus agnetis strain IVB6175
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1230180..1242552

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUA52_RS06045 (MUA52_06050)	-	1230515..1230679 (+)	165	WP_394371422.1	CsbD family protein	-
MUA52_RS06050 (MUA52_06055)	-	1230765..1230929 (+)	165	WP_164671788.1	hypothetical protein	-
MUA52_RS06055 (MUA52_06060)	-	1230981..1231991 (-)	1011	WP_262619407.1	LLM class flavin-dependent oxidoreductase	-
MUA52_RS06060 (MUA52_06065)	-	1232212..1233351 (+)	1140	WP_262627019.1	cysteine desulfurase family protein	-
MUA52_RS06065 (MUA52_06070)	mnmA	1233354..1234463 (+)	1110	WP_105995581.1	tRNA 2-thiouridine(34) synthase MnmA	-
MUA52_RS06070 (MUA52_06075)	-	1234502..1235176 (+)	675	WP_107368566.1	tetratricopeptide repeat protein	-
MUA52_RS06075 (MUA52_06080)	recD2	1235180..1237552 (+)	2373	WP_262619412.1	ATP-dependent RecD-like DNA helicase	Machinery gene
MUA52_RS06080 (MUA52_06085)	alaS	1237785..1240415 (+)	2631	WP_262619478.1	alanine--tRNA ligase	-
MUA52_RS06085 (MUA52_06090)	-	1240479..1240751 (+)	273	WP_039645438.1	IreB family regulatory phosphoprotein	-
MUA52_RS06090 (MUA52_06095)	ruvX	1240744..1241172 (+)	429	WP_037565451.1	Holliday junction resolvase RuvX	-
MUA52_RS06095 (MUA52_06100)	-	1241187..1241507 (+)	321	WP_105995584.1	DUF1292 domain-containing protein	-
MUA52_RS06100 (MUA52_06105)	-	1241838..1242482 (+)	645	WP_262619414.1	O-methyltransferase	-

Sequence

Protein

• Length: 790 a.a.
• Molecular weight: 89286.33 Da
• Isoelectric Point: 4.5497

>NTDB_id=673137 MUA52_RS06075 WP_262619412.1 1235180..1237552(+) (recD2) [Staphylococcus agnetis strain IVB6175]
MENPTLFEQSYIKGNIEVILFQNSDNYYTVLKVEVEDANEDFETMATVVGYFPNIVEGETYTFKGQVAEHPRYGKQLKAE
TFQKEIPQTRDSIVQYLSSDLFKGVGKKTAESIVDTLGDNAIQSILNDASVLEQVPKLSKAKQQQIAEQVAQNQASEQIM
IRLNELGFGAKLAMDIYKFYKDETINVIDQNPYQLVYDIRGVGFQKADQLASLVGISYTHPNRLKAGIQYIVEEICIKQG
HTYLPKDTLMTESSTLLTKQHETTIDQTMLEDVLSQLIEEQRLINDNDYIAIPSLYYSELKSSQNIYKLMHNQVFMDTFD
QSDIQLQIGEIEESNGVTYAEAQKEALEAAMQNKMMILTGGPGTGKTTVIKGIVHLYAALHGISLNYDDYGDEDYPVVLA
APTGRASKRLHDATGLEAMTIHRLIGWNQDTKPEDILDNEIHAKLIIIDEMSMVDTWLFHQFMAAVPEDAQVVLVGDEDQ
LPSVGPGQVFKDLISSKSLKRINLKEVYRQQDGSSIIALAHNMKAGLNVDITERFHDRSFIPCHIDQIPEVVRKVVTNAV
NKGYDMSDIQVLAPMYRGNAGIHKLNKVLQDILNPIENDDTREIHFGDIVYRKGDKVLQLVNRPNDNIFNGDIGVIVGIF
WAKENALNKDVVIVDYEGNEITYLKSDLTELTHAYCTSIHKAQGSEFPIVIMPIVKQYFRMLQKPILYTGLTRAKQSLVF
LGDSDAFNIGLKTEGQVRLTRQQSFLEQYFNSEETSIEVISLTEDTMYSIDPMINMQNVSPYDFMEIDNV

Nucleotide

• Length: 2373 bp

>NTDB_id=673137 MUA52_RS06075 WP_262619412.1 1235180..1237552(+) (recD2) [Staphylococcus agnetis strain IVB6175]
GTGGAAAACCCAACACTATTTGAACAGTCATATATCAAAGGGAACATCGAAGTCATTCTTTTTCAAAATAGTGATAATTA
CTATACGGTCCTCAAAGTAGAGGTTGAAGATGCTAATGAAGACTTTGAAACAATGGCAACAGTTGTTGGGTATTTTCCAA
ATATCGTAGAAGGCGAAACATATACTTTCAAAGGACAAGTAGCAGAACATCCACGGTACGGCAAACAATTAAAAGCGGAA
ACGTTTCAAAAAGAAATACCTCAAACGAGAGATTCTATTGTTCAATATTTATCAAGTGACCTGTTTAAAGGTGTGGGTAA
AAAAACAGCAGAATCCATTGTAGATACACTAGGTGATAATGCAATTCAGTCTATTTTAAATGACGCATCTGTTCTTGAAC
AAGTACCGAAATTGTCTAAAGCAAAGCAACAGCAAATTGCTGAACAAGTGGCTCAAAATCAAGCGAGTGAACAAATCATG
ATTCGCTTAAACGAACTTGGTTTTGGTGCGAAATTGGCCATGGATATTTATAAATTTTATAAGGATGAGACCATTAACGT
TATTGATCAAAATCCCTATCAACTCGTATATGATATACGTGGCGTTGGATTTCAAAAAGCTGATCAACTAGCAAGTTTAG
TAGGTATTTCGTATACACACCCTAATCGACTTAAAGCAGGGATTCAATACATTGTAGAAGAAATCTGTATTAAACAGGGG
CATACGTATTTACCTAAAGATACGTTAATGACTGAGTCTTCTACTTTACTTACTAAACAACATGAAACGACAATTGATCA
GACGATGCTTGAAGACGTGCTTAGTCAACTTATAGAAGAGCAGCGGTTGATTAATGATAACGATTATATCGCGATACCAA
GTTTGTATTATTCAGAACTTAAAAGTAGCCAAAATATCTATAAATTAATGCATAATCAAGTATTTATGGATACGTTTGAT
CAATCAGACATTCAATTACAAATTGGCGAAATTGAAGAATCAAATGGCGTGACTTATGCTGAGGCACAGAAAGAAGCACT
TGAAGCTGCAATGCAGAATAAAATGATGATTTTAACTGGTGGTCCAGGGACGGGTAAAACGACAGTAATCAAAGGGATTG
TACACCTCTATGCGGCCTTACATGGTATTTCTTTAAATTATGATGATTACGGAGATGAAGATTACCCCGTGGTCCTCGCA
GCACCTACTGGTCGTGCATCAAAAAGGCTACATGATGCGACGGGTCTTGAGGCTATGACGATTCATCGCTTGATAGGTTG
GAATCAAGATACCAAGCCAGAAGATATTCTTGATAATGAAATTCATGCAAAGCTTATCATTATTGACGAAATGTCAATGG
TGGATACATGGCTGTTTCATCAATTTATGGCAGCAGTTCCTGAAGATGCACAAGTTGTATTAGTTGGTGATGAGGATCAA
TTACCATCAGTAGGTCCAGGACAAGTATTTAAAGATTTAATCTCATCAAAATCATTAAAGCGCATTAATTTAAAAGAAGT
ATACCGCCAACAAGACGGGTCAAGTATCATTGCACTTGCACATAACATGAAGGCGGGTTTAAACGTAGATATTACCGAGC
GGTTTCATGATCGATCTTTTATTCCTTGTCATATTGATCAAATTCCAGAAGTTGTTCGTAAAGTCGTAACAAATGCTGTG
AATAAAGGTTACGATATGTCTGATATACAAGTACTTGCACCAATGTACCGTGGGAATGCTGGTATTCATAAGCTCAATAA
AGTCCTACAAGATATTTTAAATCCAATTGAAAACGATGATACAAGAGAAATACACTTTGGAGATATTGTGTACCGAAAAG
GTGACAAAGTACTTCAACTTGTTAATCGACCGAATGATAATATTTTTAATGGAGATATTGGTGTCATTGTTGGTATATTT
TGGGCGAAGGAAAATGCACTGAACAAAGATGTCGTCATTGTAGATTACGAAGGTAATGAGATTACGTATTTAAAATCGGA
TCTAACAGAATTAACACATGCGTATTGTACGTCGATTCATAAAGCACAAGGGTCAGAATTTCCAATCGTCATTATGCCGA
TAGTCAAGCAATATTTTCGGATGCTTCAAAAGCCAATTCTTTACACGGGATTAACCCGTGCAAAGCAATCACTTGTATTT
TTAGGAGATTCAGATGCTTTCAATATTGGCTTGAAAACGGAAGGGCAAGTGAGACTCACGCGGCAACAGTCCTTTTTAGA
ACAATATTTTAATTCTGAAGAGACATCGATTGAAGTCATTTCATTAACTGAAGACACAATGTATAGCATTGATCCAATGA
TTAATATGCAAAATGTAAGCCCATACGATTTTATGGAAATTGACAATGTTTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (339-544)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-720)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.112	99.747	0.49