Detailed information NTG0673107

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: MUA84_RS05845
• Genome accession: NZ_CP094813
• Coordinates: 1208612..1210984 (+)
• Length: 790 a.a.
• NCBI ID: WP_262619412.1
• Uniprot ID: -
• Organism: Staphylococcus agnetis strain IVB6177
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1203612..1215984

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUA84_RS05815 (MUA84_05810)	-	1203947..1204111 (+)	165	WP_394371422.1	CsbD family protein	-
MUA84_RS05820 (MUA84_05815)	-	1204197..1204361 (+)	165	WP_164671788.1	hypothetical protein	-
MUA84_RS05825 (MUA84_05820)	-	1204413..1205423 (-)	1011	WP_262619407.1	LLM class flavin-dependent oxidoreductase	-
MUA84_RS05830 (MUA84_05825)	-	1205644..1206783 (+)	1140	WP_262619409.1	cysteine desulfurase family protein	-
MUA84_RS05835 (MUA84_05830)	mnmA	1206786..1207895 (+)	1110	WP_105995581.1	tRNA 2-thiouridine(34) synthase MnmA	-
MUA84_RS05840 (MUA84_05835)	-	1207934..1208608 (+)	675	WP_107368566.1	tetratricopeptide repeat protein	-
MUA84_RS05845 (MUA84_05840)	recD2	1208612..1210984 (+)	2373	WP_262619412.1	ATP-dependent RecD-like DNA helicase	Machinery gene
MUA84_RS05850 (MUA84_05845)	alaS	1211217..1213847 (+)	2631	WP_262619478.1	alanine--tRNA ligase	-
MUA84_RS05855 (MUA84_05850)	-	1213911..1214183 (+)	273	WP_039645438.1	IreB family regulatory phosphoprotein	-
MUA84_RS05860 (MUA84_05855)	ruvX	1214176..1214604 (+)	429	WP_037565451.1	Holliday junction resolvase RuvX	-
MUA84_RS05865 (MUA84_05860)	-	1214619..1214939 (+)	321	WP_105995584.1	DUF1292 domain-containing protein	-
MUA84_RS05870 (MUA84_05865)	-	1215270..1215914 (+)	645	WP_262619414.1	O-methyltransferase	-

Sequence

Protein

• Length: 790 a.a.
• Molecular weight: 89286.33 Da
• Isoelectric Point: 4.5497

>NTDB_id=673107 MUA84_RS05845 WP_262619412.1 1208612..1210984(+) (recD2) [Staphylococcus agnetis strain IVB6177]
MENPTLFEQSYIKGNIEVILFQNSDNYYTVLKVEVEDANEDFETMATVVGYFPNIVEGETYTFKGQVAEHPRYGKQLKAE
TFQKEIPQTRDSIVQYLSSDLFKGVGKKTAESIVDTLGDNAIQSILNDASVLEQVPKLSKAKQQQIAEQVAQNQASEQIM
IRLNELGFGAKLAMDIYKFYKDETINVIDQNPYQLVYDIRGVGFQKADQLASLVGISYTHPNRLKAGIQYIVEEICIKQG
HTYLPKDTLMTESSTLLTKQHETTIDQTMLEDVLSQLIEEQRLINDNDYIAIPSLYYSELKSSQNIYKLMHNQVFMDTFD
QSDIQLQIGEIEESNGVTYAEAQKEALEAAMQNKMMILTGGPGTGKTTVIKGIVHLYAALHGISLNYDDYGDEDYPVVLA
APTGRASKRLHDATGLEAMTIHRLIGWNQDTKPEDILDNEIHAKLIIIDEMSMVDTWLFHQFMAAVPEDAQVVLVGDEDQ
LPSVGPGQVFKDLISSKSLKRINLKEVYRQQDGSSIIALAHNMKAGLNVDITERFHDRSFIPCHIDQIPEVVRKVVTNAV
NKGYDMSDIQVLAPMYRGNAGIHKLNKVLQDILNPIENDDTREIHFGDIVYRKGDKVLQLVNRPNDNIFNGDIGVIVGIF
WAKENALNKDVVIVDYEGNEITYLKSDLTELTHAYCTSIHKAQGSEFPIVIMPIVKQYFRMLQKPILYTGLTRAKQSLVF
LGDSDAFNIGLKTEGQVRLTRQQSFLEQYFNSEETSIEVISLTEDTMYSIDPMINMQNVSPYDFMEIDNV

Nucleotide

• Length: 2373 bp

>NTDB_id=673107 MUA84_RS05845 WP_262619412.1 1208612..1210984(+) (recD2) [Staphylococcus agnetis strain IVB6177]
GTGGAAAACCCAACACTATTTGAACAGTCATATATCAAAGGGAACATCGAAGTCATTCTTTTTCAAAATAGTGATAATTA
CTATACGGTCCTCAAAGTAGAGGTTGAAGATGCTAATGAAGACTTTGAAACAATGGCAACAGTTGTTGGGTATTTTCCAA
ATATCGTAGAAGGCGAAACATATACTTTCAAAGGACAAGTAGCAGAACATCCACGGTACGGCAAACAATTAAAAGCGGAA
ACGTTTCAAAAAGAAATACCTCAAACGAGAGATTCTATTGTTCAATATTTATCAAGTGACCTGTTTAAAGGTGTGGGTAA
AAAAACAGCAGAATCCATTGTAGATACACTAGGTGATAATGCAATTCAGTCTATTTTAAATGACGCATCTGTTCTTGAAC
AAGTACCGAAATTGTCTAAAGCAAAGCAACAGCAAATTGCTGAACAAGTGGCTCAAAATCAAGCGAGTGAACAAATCATG
ATTCGCTTAAACGAACTTGGTTTTGGTGCGAAATTGGCCATGGATATTTATAAATTTTATAAGGATGAGACCATTAACGT
TATTGATCAAAATCCCTATCAACTCGTATATGATATACGTGGCGTTGGATTTCAAAAAGCTGATCAACTAGCAAGTTTAG
TAGGTATTTCGTATACACACCCTAATCGACTTAAAGCAGGGATTCAATACATTGTAGAAGAAATCTGTATTAAACAGGGG
CATACGTATTTACCTAAAGATACGTTAATGACTGAGTCTTCTACTTTACTTACTAAACAACATGAAACGACAATTGATCA
GACGATGCTTGAAGACGTGCTTAGTCAACTTATAGAAGAGCAGCGGTTGATTAATGATAACGATTATATCGCGATACCAA
GTTTGTATTATTCAGAACTTAAAAGTAGCCAAAATATCTATAAATTAATGCATAATCAAGTATTTATGGATACGTTTGAT
CAATCAGACATTCAATTACAAATTGGCGAAATTGAAGAATCAAATGGCGTGACTTATGCTGAGGCACAGAAAGAAGCACT
TGAAGCTGCAATGCAGAATAAAATGATGATTTTAACTGGTGGTCCAGGGACGGGTAAAACGACAGTAATCAAAGGGATTG
TACACCTCTATGCGGCCTTACATGGTATTTCTTTAAATTATGATGATTACGGAGATGAAGATTACCCCGTGGTCCTCGCA
GCACCTACTGGTCGTGCATCAAAAAGGCTACATGATGCGACGGGTCTTGAGGCTATGACGATTCATCGCTTGATAGGTTG
GAATCAAGATACCAAGCCAGAAGATATTCTTGATAATGAAATTCATGCAAAGCTTATCATTATTGACGAAATGTCAATGG
TGGATACATGGCTGTTTCATCAATTTATGGCAGCAGTTCCTGAAGATGCACAAGTTGTATTAGTTGGTGATGAGGATCAA
TTACCATCAGTAGGTCCAGGACAAGTATTTAAAGATTTAATCTCATCAAAATCATTAAAGCGCATTAATTTAAAAGAAGT
ATACCGCCAACAAGACGGGTCAAGTATCATTGCACTTGCACATAACATGAAGGCGGGTTTAAACGTAGATATTACCGAGC
GGTTTCATGATCGATCTTTTATTCCTTGTCATATTGATCAAATTCCAGAAGTTGTTCGTAAAGTCGTAACAAATGCTGTG
AATAAAGGTTACGATATGTCTGATATACAAGTACTTGCACCAATGTACCGTGGGAATGCTGGTATTCATAAGCTCAATAA
AGTCCTACAAGATATTTTAAATCCAATTGAAAACGATGATACAAGAGAAATACACTTTGGAGATATTGTGTACCGAAAAG
GTGACAAAGTACTTCAACTTGTTAATCGACCGAATGATAATATTTTTAATGGAGATATTGGTGTCATTGTTGGTATATTT
TGGGCGAAGGAAAATGCACTGAACAAAGATGTCGTCATTGTAGATTACGAAGGTAATGAGATTACGTATTTAAAATCGGA
TCTAACAGAATTAACACATGCGTATTGTACGTCGATTCATAAAGCACAAGGGTCAGAATTTCCAATCGTCATTATGCCGA
TAGTCAAGCAATATTTTCGGATGCTTCAAAAGCCAATTCTTTACACGGGATTAACCCGTGCAAAGCAATCACTTGTATTT
TTAGGAGATTCAGATGCTTTCAATATTGGCTTGAAAACGGAAGGGCAAGTGAGACTCACGCGGCAACAGTCCTTTTTAGA
ACAATATTTTAATTCTGAAGAGACATCGATTGAAGTCATTTCATTAACTGAAGACACAATGTATAGCATTGATCCAATGA
TTAATATGCAAAATGTAAGCCCATACGATTTTATGGAAATTGACAATGTTTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (339-544)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-720)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.112	99.747	0.49