Detailed information NTG0673076

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: MUA43_RS05830
• Genome accession: NZ_CP094812
• Coordinates: 1196943..1199315 (+)
• Length: 790 a.a.
• NCBI ID: WP_262608873.1
• Uniprot ID: -
• Organism: Staphylococcus agnetis strain IVB6186
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1191943..1204315

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUA43_RS05800 (MUA43_05790)	-	1192257..1192442 (+)	186	WP_105995578.1	CsbD family protein	-
MUA43_RS05805 (MUA43_05795)	-	1192528..1192692 (+)	165	WP_164671788.1	hypothetical protein	-
MUA43_RS05810 (MUA43_05800)	-	1192744..1193754 (-)	1011	WP_060551182.1	LLM class flavin-dependent oxidoreductase	-
MUA43_RS05815 (MUA43_05805)	-	1193975..1195114 (+)	1140	WP_060551181.1	cysteine desulfurase family protein	-
MUA43_RS05820 (MUA43_05810)	mnmA	1195117..1196226 (+)	1110	WP_060551180.1	tRNA 2-thiouridine(34) synthase MnmA	-
MUA43_RS05825 (MUA43_05815)	-	1196265..1196939 (+)	675	WP_060551179.1	tetratricopeptide repeat protein	-
MUA43_RS05830 (MUA43_05820)	recD2	1196943..1199315 (+)	2373	WP_262608873.1	ATP-dependent RecD-like DNA helicase	Machinery gene
MUA43_RS05835 (MUA43_05825)	alaS	1199548..1202178 (+)	2631	WP_060551177.1	alanine--tRNA ligase	-
MUA43_RS05840 (MUA43_05830)	-	1202242..1202514 (+)	273	WP_039645438.1	IreB family regulatory phosphoprotein	-
MUA43_RS05845 (MUA43_05835)	ruvX	1202507..1202935 (+)	429	WP_037565451.1	Holliday junction resolvase RuvX	-
MUA43_RS05850 (MUA43_05840)	-	1202950..1203270 (+)	321	WP_105995584.1	DUF1292 domain-containing protein	-
MUA43_RS05855 (MUA43_05845)	-	1203602..1204246 (+)	645	WP_060551175.1	O-methyltransferase	-

Sequence

Protein

• Length: 790 a.a.
• Molecular weight: 89188.18 Da
• Isoelectric Point: 4.6128

>NTDB_id=673076 MUA43_RS05830 WP_262608873.1 1196943..1199315(+) (recD2) [Staphylococcus agnetis strain IVB6186]
MENPTLFEQSYIKGNIEVILFQNSDNYYTVLKVEVEDSNEDFETMATVVGYFPNIVEGETYTFKGQVAEHPRYGKQLKAE
TFQKEIPQTRDSIVQYLSSDLFKGVGKKTAESIVDTLGDNAIQSILNDASVLEQVPKLSKVKQQQIAEQVSQNQASEQIM
IRLNELGFGAKLAMDIYKFYKDETINVIDQNPYQLVYDIRGVGFQKADQLASLVGISYTHPNRLKAGIQYIVEEICIKQG
HTYLPKDTLMTESSTLLTKQHETAIDQTMLEDVLSQLIEEQRLINDNDHIAIPSLYYSELKSSQNIYKLMHNQVFMDTFD
QSDIQLHIGEIEESNGVTYAEAQKEALEAAMQNKMMILTGGPGTGKTTVIKGIVHLYAALHGISLNYDDYGDEDYPVVLA
APTGRASKRLHDATGLEAMTIHRLIGWNQDTKPEDILDNEIHAKLIIIDEMSMVDTWLFHQFMAAVPEDAQVVLVGDEDQ
LPSVGPGQVFKDLISSKSLKRINLKEVYRQQDGSSIIALAHNMKAGLNVDITERFHDRSFIPCHIDQIPEVVRKVVTNAV
SKGYDMSDIQVLAPMYRGNAGIHKLNKVLQDILNPIENDDTRAIHFGDIVYRKGDKVLQLVNRPNDNIFNGDIGVIVGIF
WAKENALNKDVVIVDYEGNEITYLKSDLTELTHAYCTSIHKAQGSEFPIVIMPIVKQYFRMLQKPILYTGLTRAKQSLVF
LGDSDAFNIGLKTEGQVRLTRQQSFLEQYFNSEETSSEVISLTEDTMYSIDPMINMQNVSPYDFMEIDNV

Nucleotide

• Length: 2373 bp

>NTDB_id=673076 MUA43_RS05830 WP_262608873.1 1196943..1199315(+) (recD2) [Staphylococcus agnetis strain IVB6186]
GTGGAAAACCCAACACTATTTGAACAGTCATATATCAAAGGGAACATCGAAGTCATTCTTTTTCAAAATAGTGATAATTA
CTATACGGTCCTCAAAGTAGAGGTTGAAGATTCTAATGAAGACTTTGAAACAATGGCAACAGTTGTTGGGTATTTTCCAA
ATATCGTTGAAGGCGAAACATATACTTTCAAAGGTCAAGTAGCAGAACATCCTCGGTACGGCAAACAATTAAAAGCAGAA
ACGTTTCAAAAAGAAATACCTCAAACGAGAGATTCTATTGTTCAATATTTATCAAGTGACCTGTTTAAAGGTGTGGGTAA
AAAAACAGCAGAATCCATTGTAGATACATTAGGTGACAATGCAATTCAGTCTATTTTAAATGACGCATCAGTTCTTGAAC
AAGTACCGAAATTGTCTAAAGTAAAGCAACAGCAAATTGCAGAACAAGTGTCTCAAAATCAAGCGAGTGAACAAATCATG
ATTCGCTTAAACGAACTTGGTTTTGGTGCGAAATTGGCCATGGATATTTATAAATTTTATAAGGATGAGACCATTAACGT
TATTGATCAAAATCCCTATCAACTCGTATATGATATACGTGGCGTAGGCTTTCAAAAAGCTGATCAACTTGCAAGTTTAG
TAGGTATTTCGTATACACACCCAAATCGACTTAAAGCAGGGATTCAATACATTGTAGAAGAAATCTGTATTAAACAGGGG
CATACGTATTTACCTAAAGATACGTTAATGACTGAGTCCTCTACCTTACTTACTAAACAACACGAAACAGCAATTGATCA
GACGATGCTTGAAGACGTACTTAGTCAACTTATAGAAGAGCAGCGGTTGATTAATGATAATGATCATATCGCGATACCAA
GTTTGTATTATTCAGAACTTAAAAGTAGCCAAAATATCTATAAATTAATGCATAATCAAGTATTTATGGATACGTTTGAT
CAATCAGACATTCAATTACATATTGGTGAAATTGAAGAATCAAATGGCGTGACTTATGCTGAGGCACAAAAAGAAGCACT
TGAAGCTGCAATGCAAAATAAAATGATGATTTTAACTGGTGGTCCAGGGACGGGTAAAACGACAGTAATCAAAGGGATTG
TACACCTCTATGCGGCCTTACATGGTATTTCTTTAAATTATGACGATTACGGAGATGAAGATTACCCCGTGGTCCTCGCA
GCACCTACTGGTCGTGCATCGAAAAGGTTGCATGATGCGACGGGTCTTGAGGCTATGACGATTCATCGCTTGATAGGTTG
GAATCAAGATACCAAGCCAGAAGACATTCTAGATAATGAAATTCATGCAAAGCTTATCATTATTGATGAAATGTCAATGG
TGGATACATGGCTATTTCATCAATTTATGGCAGCAGTTCCTGAAGATGCACAAGTTGTATTAGTTGGTGATGAGGATCAA
TTACCATCAGTAGGTCCAGGACAAGTATTTAAAGATTTAATCTCATCAAAATCATTAAAGCGCATTAATTTAAAAGAAGT
ATACCGCCAACAAGATGGTTCAAGTATTATTGCACTTGCTCATAACATGAAGGCGGGTTTAAACGTAGACATTACCGAGC
GGTTTCATGATCGATCCTTTATTCCTTGTCATATTGATCAAATTCCAGAAGTTGTTCGTAAAGTCGTAACAAATGCCGTG
AGTAAAGGTTATGATATGTCTGATATTCAAGTACTTGCACCAATGTACCGTGGGAATGCGGGTATTCATAAGCTCAATAA
AGTCCTACAAGATATTTTAAATCCAATTGAAAACGATGATACAAGAGCAATACACTTTGGAGATATTGTGTACCGAAAAG
GTGACAAAGTACTTCAACTTGTTAATCGACCGAATGATAATATTTTTAATGGAGATATTGGTGTCATTGTTGGTATATTT
TGGGCGAAGGAAAATGCACTGAACAAAGATGTGGTCATTGTGGATTACGAAGGTAATGAGATTACGTATTTAAAATCGGA
TCTAACAGAATTAACACATGCGTATTGTACGTCAATTCATAAAGCGCAAGGGTCAGAATTTCCAATCGTCATTATGCCGA
TAGTTAAACAATATTTTCGGATGCTTCAAAAGCCAATTCTTTATACTGGATTAACCCGTGCAAAGCAATCACTTGTATTT
TTAGGAGATTCAGATGCTTTCAATATTGGTTTGAAAACGGAAGGCCAAGTGAGACTCACGCGGCAACAATCCTTTTTAGA
ACAATATTTTAATTCTGAAGAGACATCGAGTGAAGTCATTTCATTAACTGAAGACACAATGTATAGCATTGATCCAATGA
TTAATATGCAAAATGTAAGCCCATACGATTTTATGGAAATTGACAATGTTTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-720)

• AAA domain (AAA_30) (339-544)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	48.985	99.747	0.489