Detailed information NTG0672981

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: MUA11_RS05805
• Genome accession: NZ_CP094808
• Coordinates: 1212453..1214825 (+)
• Length: 790 a.a.
• NCBI ID: WP_262626006.1
• Uniprot ID: -
• Organism: Staphylococcus agnetis strain IVB6212
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1207453..1219825

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUA11_RS05775 (MUA11_05770)	-	1207788..1207952 (+)	165	WP_394371422.1	CsbD family protein	-
MUA11_RS05780 (MUA11_05775)	-	1208038..1208202 (+)	165	WP_164671788.1	hypothetical protein	-
MUA11_RS05785 (MUA11_05780)	-	1208254..1209264 (-)	1011	WP_262626003.1	LLM class flavin-dependent oxidoreductase	-
MUA11_RS05790 (MUA11_05785)	-	1209485..1210624 (+)	1140	WP_262626004.1	cysteine desulfurase family protein	-
MUA11_RS05795 (MUA11_05790)	mnmA	1210627..1211736 (+)	1110	WP_105995581.1	tRNA 2-thiouridine(34) synthase MnmA	-
MUA11_RS05800 (MUA11_05795)	-	1211775..1212449 (+)	675	WP_262626005.1	tetratricopeptide repeat protein	-
MUA11_RS05805 (MUA11_05800)	recD2	1212453..1214825 (+)	2373	WP_262626006.1	ATP-dependent RecD-like DNA helicase	Machinery gene
MUA11_RS05810 (MUA11_05805)	alaS	1215058..1217688 (+)	2631	WP_262626038.1	alanine--tRNA ligase	-
MUA11_RS05815 (MUA11_05810)	-	1217752..1218024 (+)	273	WP_039645438.1	IreB family regulatory phosphoprotein	-
MUA11_RS05820 (MUA11_05815)	ruvX	1218017..1218445 (+)	429	WP_037565451.1	Holliday junction resolvase RuvX	-
MUA11_RS05825 (MUA11_05820)	-	1218460..1218780 (+)	321	WP_262624985.1	DUF1292 domain-containing protein	-
MUA11_RS05830 (MUA11_05825)	-	1219111..1219755 (+)	645	WP_262619414.1	O-methyltransferase	-

Sequence

Protein

• Length: 790 a.a.
• Molecular weight: 89277.32 Da
• Isoelectric Point: 4.5282

>NTDB_id=672981 MUA11_RS05805 WP_262626006.1 1212453..1214825(+) (recD2) [Staphylococcus agnetis strain IVB6212]
MENPTLFEQSYIKGNIEVILFQNSDNYYTVLKVEVEDANEDFETMATVVGYFPNIVEGETYTFKGQVAEHPRYGKQLKAE
TFQKEIPQTRDSIVQYLSSDLFKGVGKKTAESIVDTLGDNAIQSILNDASVLEQVPKLSKAKQQQIAEQVAQNQASEQIM
IRLNELGFGAKLAMDIYKFYKDETINVIDQNPYQLVYDIRGVGFQKADQLASLVGISYTHPNRLKAGIQYIVEEICIKQG
HTYLPKDTLMTESSTLLTKQQETTIDQTMLEDVLSQLIEEQRLINDNDYIAIPSLYYSELKSSQNIYKLMHNQVFMDTFD
QSDIQLQIGEIEESNGVTYAEAQKEALEAAMQNKMMILTGGPGTGKTTVIKGIVHLYAALHGISLNYDDYGDEDYPVVLA
APTGRASKRLHDATGLEAMTIHRLIGWNQDTKPEDILDNEIHAKLIIIDEMSMVDTWLFHQFMAAVPEDAQVVLVGDEDQ
LPSVGPGQVFKDLISSKSLKRINLKEVYRQQDGSSIIALAHNMKAGLNVDITERFHDRSFIPCHIDQIPEVVRKVVTNAV
NKGYDMSDIQVLAPMYRGNAGIHKLNKVLQDILNPIENDDTREIHFGDIVYRKGDKVLQLVNRPNDNIFNGDIGVIVGIF
WAKENALNKDVVIVDYEGNEITYLKSDLTELTHAYCTSIHKAQGSEFPIVIMPIVKQYFRMLQKPILYTGLTRAKQSLVF
LGDSDAFNIGLKTEGQVRLTRQQSFLEQYFNSEETSIEVISLTEDTMYSIDPMINMQNVSPYDFMEIDNV

Nucleotide

• Length: 2373 bp

>NTDB_id=672981 MUA11_RS05805 WP_262626006.1 1212453..1214825(+) (recD2) [Staphylococcus agnetis strain IVB6212]
GTGGAAAACCCAACACTATTTGAACAGTCATATATCAAAGGGAACATCGAAGTCATTCTTTTTCAAAATAGTGATAATTA
CTATACGGTCCTCAAAGTAGAGGTTGAAGATGCTAATGAAGACTTTGAAACAATGGCAACAGTTGTTGGGTATTTTCCAA
ATATCGTAGAAGGCGAAACATATACTTTCAAAGGACAAGTAGCAGAACATCCACGGTACGGCAAACAATTAAAAGCTGAA
ACGTTTCAAAAAGAAATACCTCAAACGAGAGATTCTATTGTTCAATATTTATCAAGTGACTTGTTTAAAGGTGTGGGTAA
AAAAACAGCAGAATCCATTGTAGATACACTAGGTGACAATGCAATTCAGTCTATTTTAAATGACGCATCTGTTCTTGAAC
AAGTACCGAAATTGTCTAAAGCAAAGCAACAGCAAATTGCTGAACAAGTGGCTCAAAATCAAGCGAGTGAACAAATCATG
ATTCGCTTAAACGAACTTGGTTTTGGTGCGAAATTGGCCATGGATATTTATAAATTTTATAAGGATGAGACCATTAACGT
TATTGATCAAAATCCCTATCAACTCGTATATGATATACGTGGCGTTGGATTTCAAAAAGCTGATCAACTAGCAAGTTTAG
TAGGTATTTCGTATACACACCCTAATCGACTTAAAGCAGGGATTCAATACATTGTAGAAGAAATCTGTATTAAACAGGGG
CATACGTATTTACCTAAAGATACGTTAATGACTGAGTCTTCTACCTTACTTACTAAACAACAAGAAACGACAATTGATCA
GACGATGCTTGAAGACGTGCTTAGTCAACTTATAGAAGAGCAGCGGTTGATTAATGATAACGATTATATCGCGATACCAA
GTTTGTATTATTCAGAACTTAAAAGTAGCCAAAATATCTATAAATTAATGCATAATCAAGTATTTATGGATACGTTTGAT
CAATCAGACATTCAATTACAAATTGGCGAAATTGAAGAATCAAATGGCGTGACTTATGCTGAGGCACAGAAAGAAGCACT
TGAAGCTGCAATGCAGAATAAAATGATGATTTTAACTGGTGGTCCAGGGACGGGTAAAACGACAGTAATCAAAGGGATTG
TACACCTCTATGCGGCCTTACATGGTATTTCTTTAAATTATGATGATTACGGAGATGAAGATTACCCCGTGGTCCTCGCA
GCACCTACTGGTCGTGCATCAAAAAGGCTACATGATGCGACGGGTCTTGAGGCTATGACGATTCATCGCTTGATAGGTTG
GAATCAAGATACCAAGCCAGAAGATATTCTTGATAATGAAATTCATGCAAAGCTTATCATTATTGACGAAATGTCAATGG
TGGATACATGGCTGTTTCATCAATTTATGGCAGCAGTTCCTGAAGATGCACAAGTTGTATTAGTTGGTGATGAGGATCAA
TTACCATCAGTAGGTCCAGGACAAGTATTTAAAGATTTAATCTCATCAAAATCATTAAAGCGCATTAATTTAAAAGAAGT
ATACCGCCAACAAGACGGGTCAAGTATCATTGCACTTGCACATAACATGAAGGCGGGTTTAAACGTAGATATTACCGAGC
GGTTTCATGATCGATCTTTTATTCCTTGTCATATTGATCAAATTCCAGAAGTTGTTCGTAAAGTCGTAACAAATGCTGTG
AATAAAGGTTACGATATGTCTGATATACAAGTACTTGCACCAATGTACCGTGGGAATGCTGGTATTCATAAGCTCAATAA
AGTCCTACAAGATATTTTAAATCCAATTGAAAACGATGATACAAGAGAAATACACTTTGGAGATATTGTGTACCGAAAAG
GTGACAAAGTACTTCAACTTGTTAATCGACCGAATGATAATATTTTTAATGGAGATATTGGTGTCATTGTTGGTATATTT
TGGGCGAAGGAAAATGCACTGAACAAAGATGTCGTCATTGTAGATTACGAAGGTAATGAGATTACGTATTTAAAATCGGA
TCTAACAGAATTAACACATGCGTATTGTACGTCGATTCATAAAGCACAAGGGTCAGAATTTCCAATCGTCATTATGCCGA
TAGTCAAGCAATATTTTCGGATGCTTCAAAAGCCAATTCTTTACACGGGATTAACCCGTGCAAAGCAATCACTTGTATTT
TTAGGAGATTCAGATGCTTTCAATATTGGCTTGAAAACGGAAGGGCAAGTGAGACTCACGCGGCAACAGTCCTTTTTAGA
ACAATATTTTAATTCTGAAGAGACATCGATTGAAGTCATTTCATTAACTGAAGACACAATGTATAGCATTGATCCAATGA
TTAATATGCAAAATGTAAGCCCATACGATTTTATGGAAATTGACAATGTTTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• AAA domain (AAA_30) (339-544)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-720)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.112	99.747	0.49