Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OHB03_RS19170 Genome accession   NZ_CP109266
Coordinates   4279746..4280870 (+) Length   374 a.a.
NCBI ID   WP_030972387.1    Uniprot ID   A0ABV2U8C8
Organism   Streptomyces sp. NBC_01643     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4274746..4285870
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHB03_RS19155 (OHB03_19180) - 4275328..4276197 (+) 870 WP_267004539.1 hypothetical protein -
  OHB03_RS19160 (OHB03_19185) - 4276229..4278013 (-) 1785 WP_406406256.1 BACON domain-containing protein -
  OHB03_RS19165 (OHB03_19190) radA/sms 4278253..4279665 (+) 1413 WP_326604438.1 DNA repair protein RadA Machinery gene
  OHB03_RS19170 (OHB03_19195) disA 4279746..4280870 (+) 1125 WP_030972387.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHB03_RS19175 (OHB03_19200) - 4281025..4281762 (-) 738 WP_406406258.1 hypothetical protein -
  OHB03_RS19180 (OHB03_19205) - 4282688..4283590 (+) 903 WP_326629355.1 A/G-specific adenine glycosylase -
  OHB03_RS19185 (OHB03_19210) - 4283766..4284416 (+) 651 WP_330245149.1 SigE family RNA polymerase sigma factor -
  OHB03_RS19190 (OHB03_19215) - 4284485..4285096 (+) 612 WP_330245150.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40389.30 Da        Isoelectric Point: 4.8644

>NTDB_id=672949 OHB03_RS19170 WP_030972387.1 4279746..4280870(+) (disA) [Streptomyces sp. NBC_01643]
MAASDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSRQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDGLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEYFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=672949 OHB03_RS19170 WP_030972387.1 4279746..4280870(+) (disA) [Streptomyces sp. NBC_01643]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAATGAGGCGCTGATGCGCGCCTCATT
GAGCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGTGGCAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACGCGGCTGCGC
GAGCTGGCCAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACGAAGATTCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGAACCCGCCATCGCACGGCGGACCGGGTCTCCAGGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCGTCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGTGCCAACCAGGCCCTCGCCACCCTGGAGCGATACAAGCTCCGTCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTGACGGCTGTCGCGCAACGTCTGGAGATGGTCCGCCGGATCG
CGACCGAAATCGCCGAATATGTGGTGGAACTGGGCACCGACGGCCGGCTTCTCTCCCTCCAGCTCGACGAGTTGATCGCG
GGAGTCGAGCCGGAGCGAGAGCTGGTCGTGCGTGACTACGTGCCGGAGCCGACCGCCAAGCGGTCGCGTACGGTCGCGGA
AGCGCTGACCGAGCTGGACGGGCTCTCCCACACCGAGCTGCTCGAACTCCCGGTCGTGGCACGGGCCCTGGGGTACAGCG
GCTCACCCGAGACCCTCGACTCGGCCGTCTCGCCCCGCGGTTTCCGGTTGCTGGCGAAGGTGCCGCGACTCCCCGGGGCG
ATCATCGACCGGCTGGTGGAGTACTTCGGCGGACTGCAGAAGCTGCTCGCGGCGAGCGTCGACGACCTTCAGACGGTGGA
CGGAGTCGGCGAGGCTCGGGCGCGGAGCGTGCGCGAGGGGCTGTCGCGACTGGCCGAGTCGTCAATTCTTGAGCGGTACG
TGTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433