Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MUA85_RS09900 Genome accession   NZ_CP094799
Coordinates   2001817..2002860 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain IVB6159     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1996817..2007860
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA85_RS09870 (MUA85_09850) - 1997236..1998492 (-) 1257 WP_250425878.1 aminopeptidase -
  MUA85_RS09875 (MUA85_09855) - 1998495..1998695 (-) 201 WP_000180460.1 DUF1128 family protein -
  MUA85_RS09880 (MUA85_09860) - 1998842..1999306 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  MUA85_RS09885 (MUA85_09865) - 1999313..1999588 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  MUA85_RS09890 (MUA85_09870) - 1999868..2001085 (+) 1218 WP_000037081.1 YihY/virulence factor BrkB family protein -
  MUA85_RS09895 (MUA85_09875) vraR 2001198..2001827 (-) 630 WP_000153530.1 two-component system response regulator VraR Regulator
  MUA85_RS09900 (MUA85_09880) vraS 2001817..2002860 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  MUA85_RS09905 (MUA85_09885) liaF 2002857..2003558 (-) 702 WP_000149070.1 cell wall-active antibiotics response protein LiaF -
  MUA85_RS09910 (MUA85_09890) - 2003573..2003959 (-) 387 WP_001110179.1 hypothetical protein -
  MUA85_RS09915 (MUA85_09895) map 2004176..2004934 (-) 759 WP_111014375.1 type I methionyl aminopeptidase -
  MUA85_RS09920 (MUA85_09900) - 2005461..2006447 (+) 987 WP_000999713.1 FUSC family protein -
  MUA85_RS09925 (MUA85_09905) - 2006636..2007049 (-) 414 WP_025174666.1 hypothetical protein -
  MUA85_RS09930 (MUA85_09910) - 2007078..2007188 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=672812 MUA85_RS09900 WP_001017131.1 2001817..2002860(-) (vraS) [Staphylococcus aureus strain IVB6159]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=672812 MUA85_RS09900 WP_001017131.1 2001817..2002860(-) (vraS) [Staphylococcus aureus strain IVB6159]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATTTTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATT
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCGGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1