Detailed information NTG0672764

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: MUA16_RS08185
• Genome accession: NZ_CP094797
• Coordinates: 1693377..1695851 (-)
• Length: 824 a.a.
• NCBI ID: WP_262515720.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain IVB6163
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1688377..1700851

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUA16_RS08160 (MUA16_08155)	-	1688403..1689041 (-)	639	WP_000342261.1	O-methyltransferase	-
MUA16_RS08165 (MUA16_08160)	-	1689326..1689634 (-)	309	WP_000134779.1	DUF1292 domain-containing protein	-
MUA16_RS08170 (MUA16_08165)	ruvX	1689649..1690077 (-)	429	WP_000939059.1	Holliday junction resolvase RuvX	-
MUA16_RS08175 (MUA16_08170)	-	1690081..1690341 (-)	261	WP_000426912.1	IreB family regulatory phosphoprotein	-
MUA16_RS08180 (MUA16_08175)	alaS	1690404..1693034 (-)	2631	WP_000734077.1	alanine--tRNA ligase	-
MUA16_RS08185 (MUA16_08180)	recD2	1693377..1695851 (-)	2475	WP_262515720.1	ATP-dependent RecD-like DNA helicase	Machinery gene
MUA16_RS08190 (MUA16_08185)	-	1695853..1696521 (-)	669	WP_000567025.1	tetratricopeptide repeat protein	-
MUA16_RS08195 (MUA16_08190)	mnmA	1697203..1698321 (-)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-
MUA16_RS08200 (MUA16_08195)	-	1698322..1699464 (-)	1143	WP_000409167.1	cysteine desulfurase family protein	-
MUA16_RS08205 (MUA16_08200)	-	1699774..1700787 (+)	1014	WP_000985898.1	LLM class flavin-dependent oxidoreductase	-

Sequence

Protein

• Length: 824 a.a.
• Molecular weight: 92821.56 Da
• Isoelectric Point: 4.5084

>NTDB_id=672764 MUA16_RS08185 WP_262515720.1 1693377..1695851(-) (recD2) [Staphylococcus aureus strain IVB6163]
MSDPTLFDYSMIKGTVEAILFQNSDNFYTVLKVDTIETNEDFDTMPTVVGFLPNIVEGDVYTFKGQVVDHPRYGKQLKAE
TFEKEMPQTKEAIISYLSSDLFKGVGKKTAQNIVNTLGDNAINDILDDHSVLEKVSGLSKKKQKQIAEQISANQESEKIM
IRLHDLGFGPKLSMAIYQFYLGDTLTILDRNPYQLIYDIKGIGFNKADQLARNIGIAYNDNERLKAALLYTLEECIKQGH
TYLPINVVIDLTVDVLNYQDEEVIEPEKLDEMLQYLNEEKRLIIDNEQVAIPSLYYSEIKSVQNLFRIKTHTNKLTEIEQ
SDLQMHIGEIEDANQVNYAASQKEALQTAINSKVMLLTGGPGTGKTTVIKGIVELYAEIHGLSLDYDDYVNDDYPVVLAA
PTGRASKRLQESTGLEAMTIHRLIGWNQDTKPEDILENEINARLIIIDEMSMVDTWLFHQFLSAVPLDAQLIFVGDEDQL
PSVGPGQVFKDLIESKAIPRVNLTEVYRQQDGSSIIELAHRMKLGQKIDITQRFHDRSFINCQANQIPTVVEKVVTSAVN
KGYTMADIQVLAPMYKGNAGIKRLNQVLQDILNPKKKDTREIEFGDVVFRKGDKVLQLVNRPNDNIFNGDIGVIVGIFWA
KENALNKDVLVVDFEGNEITFTKQDMMELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKTSLVLLG
DSEAFDIGLKTNGQARLTQLCTLLKNYFNSEDEDMLENTATNDTGASQTTIDDQVEAPMSSNASEEVTSDSTKTDTNVLT
EATMFKIDPMINMGEITPYDFIER

Nucleotide

• Length: 2475 bp

>NTDB_id=672764 MUA16_RS08185 WP_262515720.1 1693377..1695851(-) (recD2) [Staphylococcus aureus strain IVB6163]
ATGTCAGACCCTACACTATTTGATTATTCAATGATCAAAGGTACTGTTGAAGCGATATTGTTTCAAAACAGTGATAATTT
TTATACAGTGCTTAAAGTAGATACTATTGAAACAAATGAAGACTTTGATACAATGCCAACTGTTGTAGGGTTTCTTCCGA
ATATTGTTGAAGGCGATGTCTACACATTTAAAGGGCAAGTTGTTGATCATCCACGTTATGGTAAACAATTAAAAGCAGAG
ACTTTTGAAAAAGAAATGCCACAAACGAAAGAAGCAATTATAAGTTATTTATCAAGTGATTTGTTTAAAGGTGTAGGTAA
AAAGACAGCTCAAAATATTGTTAATACATTAGGTGACAATGCGATAAACGATATATTAGATGACCATTCAGTTCTAGAAA
AAGTTTCGGGATTATCTAAAAAGAAACAGAAACAAATTGCAGAACAAATTTCAGCAAATCAAGAATCTGAAAAAATAATG
ATTCGTTTACATGATTTAGGGTTTGGTCCTAAACTTTCAATGGCAATTTATCAGTTTTATCTCGGTGATACACTGACTAT
TTTAGATCGAAATCCATATCAATTGATTTATGATATTAAAGGTATTGGTTTTAATAAAGCAGATCAACTTGCTAGAAATA
TTGGTATCGCTTATAACGATAATGAACGATTAAAAGCTGCGTTGCTCTATACGTTAGAAGAATGTATTAAACAGGGACAT
ACATATTTGCCTATCAATGTTGTTATAGATTTAACGGTTGATGTCTTAAATTATCAAGATGAAGAGGTCATCGAACCTGA
AAAATTAGACGAAATGTTGCAATACTTAAATGAGGAAAAACGACTAATTATTGACAATGAACAAGTTGCAATTCCAAGTT
TGTATTATTCTGAAATCAAAAGTGTTCAAAACTTATTCAGAATAAAGACGCATACAAATAAACTTACGGAAATTGAACAG
TCAGATTTACAAATGCATATTGGCGAAATAGAGGATGCGAATCAAGTGAACTATGCAGCTTCACAAAAAGAAGCTTTGCA
AACGGCTATCAATTCTAAGGTGATGCTATTAACCGGTGGACCGGGAACAGGAAAGACGACAGTAATTAAAGGCATTGTAG
AATTATATGCTGAGATTCATGGCTTATCATTAGATTATGATGATTATGTCAATGATGATTATCCAGTTGTATTAGCAGCG
CCAACAGGAAGAGCGTCCAAGAGACTACAAGAGTCAACTGGATTAGAAGCTATGACGATTCATCGTTTAATAGGTTGGAA
TCAAGACACAAAGCCAGAGGATATATTAGAAAATGAAATTAACGCACGACTCATAATCATTGATGAGATGTCTATGGTAG
ATACTTGGTTGTTCCACCAATTTTTAAGTGCAGTTCCTTTAGATGCACAATTGATATTTGTAGGTGATGAGGACCAATTG
CCTTCTGTAGGTCCTGGTCAAGTATTTAAAGATTTAATTGAATCGAAAGCTATACCACGAGTTAATCTGACTGAAGTATA
TCGTCAACAAGATGGTTCAAGCATTATAGAATTAGCACATCGAATGAAGTTGGGTCAGAAAATTGATATTACACAGCGTT
TTCATGATAGAAGTTTTATTAACTGTCAGGCAAACCAAATACCAACAGTTGTTGAGAAGGTAGTTACTAGTGCTGTTAAT
AAAGGGTATACTATGGCTGATATTCAAGTGCTTGCACCAATGTATAAAGGAAATGCCGGTATTAAACGTTTAAATCAAGT
TTTACAAGATATTTTAAACCCTAAAAAGAAAGACACACGAGAAATTGAGTTTGGTGATGTAGTCTTTAGAAAAGGTGACA
AAGTATTACAACTTGTTAATAGGCCAAATGATAACATATTCAATGGTGACATAGGAGTTATTGTTGGTATTTTTTGGGCG
AAAGAAAATGCCCTTAATAAAGATGTGCTTGTTGTGGATTTTGAAGGTAATGAAATTACATTTACGAAACAAGATATGAT
GGAATTAACACATGCATATTGTACATCAATCCATAAATCACAAGGTTCAGAATTTCCTATTGTTATCATGCCTATTGTTA
AACAGTATTTTAGAATGTTACAAAGACCGATATTATATACTGGTTTAACTAGAGCGAAAACCAGTTTAGTTTTACTTGGT
GATTCAGAAGCATTTGATATTGGATTGAAAACAAATGGTCAAGCGCGTTTAACACAATTATGTACATTGTTGAAAAATTA
TTTTAATTCAGAAGATGAAGACATGCTGGAAAATACAGCAACTAATGATACAGGAGCTTCGCAAACGACAATAGATGATC
AAGTAGAAGCGCCAATGTCATCGAATGCTAGTGAAGAAGTTACGTCTGATTCAACAAAAACAGATACAAATGTATTAACG
GAAGCTACAATGTTTAAAATTGACCCAATGATTAATATGGGAGAAATCACGCCGTATGACTTTATAGAACGTTGA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (671-719)

• AAA domain (AAA_30) (338-543)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (584-654)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-242)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	52.855	91.383	0.483