Detailed information NTG0672250

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: MUA50_RS06260
• Genome accession: NZ_CP094772
• Coordinates: 1237415..1239889 (+)
• Length: 824 a.a.
• NCBI ID: WP_262515720.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain IVB6196
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1232415..1244889

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUA50_RS06240 (MUA50_06235)	-	1232479..1233492 (-)	1014	WP_000985898.1	LLM class flavin-dependent oxidoreductase	-
MUA50_RS06245 (MUA50_06240)	-	1233802..1234944 (+)	1143	WP_262540153.1	cysteine desulfurase family protein	-
MUA50_RS06250 (MUA50_06245)	mnmA	1234945..1236063 (+)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-
MUA50_RS06255 (MUA50_06250)	-	1236745..1237413 (+)	669	WP_000567025.1	tetratricopeptide repeat protein	-
MUA50_RS06260 (MUA50_06255)	recD2	1237415..1239889 (+)	2475	WP_262515720.1	ATP-dependent RecD-like DNA helicase	Machinery gene
MUA50_RS06265 (MUA50_06260)	alaS	1240232..1242862 (+)	2631	WP_000734077.1	alanine--tRNA ligase	-
MUA50_RS06270 (MUA50_06265)	-	1242925..1243185 (+)	261	WP_000426912.1	IreB family regulatory phosphoprotein	-
MUA50_RS06275 (MUA50_06270)	ruvX	1243189..1243617 (+)	429	WP_000939059.1	Holliday junction resolvase RuvX	-
MUA50_RS06280 (MUA50_06275)	-	1243632..1243940 (+)	309	WP_000134779.1	DUF1292 domain-containing protein	-
MUA50_RS06285 (MUA50_06280)	-	1244225..1244863 (+)	639	WP_000342261.1	O-methyltransferase	-

Sequence

Protein

• Length: 824 a.a.
• Molecular weight: 92821.56 Da
• Isoelectric Point: 4.5084

>NTDB_id=672250 MUA50_RS06260 WP_262515720.1 1237415..1239889(+) (recD2) [Staphylococcus aureus strain IVB6196]
MSDPTLFDYSMIKGTVEAILFQNSDNFYTVLKVDTIETNEDFDTMPTVVGFLPNIVEGDVYTFKGQVVDHPRYGKQLKAE
TFEKEMPQTKEAIISYLSSDLFKGVGKKTAQNIVNTLGDNAINDILDDHSVLEKVSGLSKKKQKQIAEQISANQESEKIM
IRLHDLGFGPKLSMAIYQFYLGDTLTILDRNPYQLIYDIKGIGFNKADQLARNIGIAYNDNERLKAALLYTLEECIKQGH
TYLPINVVIDLTVDVLNYQDEEVIEPEKLDEMLQYLNEEKRLIIDNEQVAIPSLYYSEIKSVQNLFRIKTHTNKLTEIEQ
SDLQMHIGEIEDANQVNYAASQKEALQTAINSKVMLLTGGPGTGKTTVIKGIVELYAEIHGLSLDYDDYVNDDYPVVLAA
PTGRASKRLQESTGLEAMTIHRLIGWNQDTKPEDILENEINARLIIIDEMSMVDTWLFHQFLSAVPLDAQLIFVGDEDQL
PSVGPGQVFKDLIESKAIPRVNLTEVYRQQDGSSIIELAHRMKLGQKIDITQRFHDRSFINCQANQIPTVVEKVVTSAVN
KGYTMADIQVLAPMYKGNAGIKRLNQVLQDILNPKKKDTREIEFGDVVFRKGDKVLQLVNRPNDNIFNGDIGVIVGIFWA
KENALNKDVLVVDFEGNEITFTKQDMMELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKTSLVLLG
DSEAFDIGLKTNGQARLTQLCTLLKNYFNSEDEDMLENTATNDTGASQTTIDDQVEAPMSSNASEEVTSDSTKTDTNVLT
EATMFKIDPMINMGEITPYDFIER

Nucleotide

• Length: 2475 bp

>NTDB_id=672250 MUA50_RS06260 WP_262515720.1 1237415..1239889(+) (recD2) [Staphylococcus aureus strain IVB6196]
ATGTCAGACCCTACACTATTTGATTATTCAATGATCAAAGGTACTGTTGAAGCGATATTGTTTCAAAACAGTGATAATTT
TTATACAGTGCTTAAAGTAGATACTATTGAAACAAATGAAGACTTTGATACAATGCCAACTGTTGTAGGGTTTCTTCCGA
ATATTGTTGAAGGCGATGTCTACACATTTAAAGGGCAAGTTGTTGATCATCCACGTTATGGTAAACAATTAAAAGCAGAG
ACTTTTGAAAAAGAAATGCCACAAACGAAAGAAGCAATTATAAGTTATTTATCAAGTGATTTGTTTAAAGGTGTAGGTAA
AAAGACAGCTCAAAATATTGTTAATACATTAGGTGACAATGCGATAAACGATATATTAGATGACCATTCAGTTCTAGAAA
AAGTTTCGGGATTATCTAAAAAGAAACAGAAACAAATTGCAGAACAAATTTCAGCAAATCAAGAATCTGAAAAAATAATG
ATTCGTTTACATGATTTAGGGTTTGGTCCTAAACTTTCAATGGCAATTTATCAGTTTTATCTCGGTGATACACTGACTAT
TTTAGATCGAAATCCATATCAATTGATTTATGATATTAAAGGTATTGGTTTTAATAAAGCAGATCAACTTGCTAGAAATA
TTGGTATCGCTTATAACGATAATGAACGATTAAAAGCTGCGTTGCTCTATACGTTAGAAGAATGTATTAAACAGGGACAT
ACATATTTGCCTATCAATGTTGTTATAGATTTAACGGTTGATGTCTTAAATTATCAAGATGAAGAGGTCATCGAACCTGA
AAAATTAGACGAAATGTTGCAATACTTAAATGAGGAAAAACGACTAATTATTGACAATGAACAAGTTGCAATTCCAAGTT
TGTATTATTCTGAAATCAAAAGTGTTCAAAACTTATTCAGAATAAAGACGCATACAAATAAACTTACGGAAATTGAACAG
TCAGATTTACAAATGCATATTGGCGAAATAGAGGATGCGAATCAAGTGAACTATGCAGCTTCACAAAAAGAAGCTTTGCA
AACGGCTATCAATTCTAAGGTGATGCTATTAACCGGTGGACCGGGAACAGGAAAGACGACAGTAATTAAAGGCATTGTAG
AATTATATGCTGAGATTCATGGCTTATCATTAGATTATGATGATTATGTCAATGATGATTATCCAGTTGTATTAGCAGCG
CCAACAGGAAGAGCGTCCAAGAGACTACAAGAGTCAACTGGATTAGAAGCTATGACGATTCATCGTTTAATAGGTTGGAA
TCAAGACACAAAGCCAGAGGATATATTAGAAAATGAAATTAACGCACGACTCATAATCATTGATGAGATGTCTATGGTAG
ATACTTGGTTGTTCCACCAATTTTTAAGTGCAGTTCCTTTAGATGCACAATTGATATTTGTAGGTGATGAGGACCAATTG
CCTTCTGTAGGTCCTGGTCAAGTATTTAAAGATTTAATTGAATCGAAAGCTATACCACGAGTTAATCTGACTGAAGTATA
TCGTCAACAAGATGGTTCAAGCATTATAGAATTAGCACATCGAATGAAGTTGGGTCAGAAAATTGATATTACACAGCGTT
TTCATGATAGAAGTTTTATTAACTGTCAGGCAAACCAAATACCAACAGTTGTTGAGAAGGTAGTTACTAGTGCTGTTAAT
AAAGGGTATACTATGGCTGATATTCAAGTGCTTGCACCAATGTATAAAGGAAATGCCGGTATTAAACGTTTAAATCAAGT
TTTACAAGATATTTTAAACCCTAAAAAGAAAGACACACGAGAAATTGAGTTTGGTGATGTAGTCTTTAGAAAAGGTGACA
AAGTATTACAACTTGTTAATAGGCCAAATGATAACATATTCAATGGTGACATAGGAGTTATTGTTGGTATTTTTTGGGCG
AAAGAAAATGCCCTTAATAAAGATGTGCTTGTTGTGGATTTTGAAGGTAATGAAATTACATTTACGAAACAAGATATGAT
GGAATTAACACATGCATATTGTACATCAATCCATAAATCACAAGGTTCAGAATTTCCTATTGTTATCATGCCTATTGTTA
AACAGTATTTTAGAATGTTACAAAGACCGATATTATATACTGGTTTAACTAGAGCGAAAACCAGTTTAGTTTTACTTGGT
GATTCAGAAGCATTTGATATTGGATTGAAAACAAATGGTCAAGCGCGTTTAACACAATTATGTACATTGTTGAAAAATTA
TTTTAATTCAGAAGATGAAGACATGCTGGAAAATACAGCAACTAATGATACAGGAGCTTCGCAAACGACAATAGATGATC
AAGTAGAAGCGCCAATGTCATCGAATGCTAGTGAAGAAGTTACGTCTGATTCAACAAAAACAGATACAAATGTATTAACG
GAAGCTACAATGTTTAAAATTGACCCAATGATTAATATGGGAGAAATCACGCCGTATGACTTTATAGAACGTTGA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (671-719)

• AAA domain (AAA_30) (338-543)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (584-654)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-242)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	52.855	91.383	0.483