Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGE   Type   Machinery gene
Locus tag   MUA45_RS08670 Genome accession   NZ_CP094765
Coordinates   1735443..1735742 (-) Length   99 a.a.
NCBI ID   WP_000844413.1    Uniprot ID   X5E258
Organism   Staphylococcus aureus strain IVB6215     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1730443..1740742
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA45_RS08645 (MUA45_08640) gcvPA 1731655..1733001 (-) 1347 WP_000019697.1 aminomethyl-transferring glycine dehydrogenase subunit GcvPA -
  MUA45_RS08650 (MUA45_08645) gcvT 1733021..1734112 (-) 1092 WP_000093347.1 glycine cleavage system aminomethyltransferase GcvT -
  MUA45_RS08655 (MUA45_08650) - 1734271..1734795 (-) 525 WP_001015125.1 shikimate kinase -
  MUA45_RS08660 (MUA45_08655) - 1734785..1734931 (-) 147 WP_001789879.1 hypothetical protein -
  MUA45_RS08665 (MUA45_08660) comGF 1735028..1735525 (-) 498 WP_001794328.1 competence type IV pilus minor pilin ComGF Machinery gene
  MUA45_RS08670 (MUA45_08665) comGE 1735443..1735742 (-) 300 WP_000844413.1 hypothetical protein Machinery gene
  MUA45_RS08675 (MUA45_08670) comGD 1735729..1736175 (-) 447 WP_001791207.1 competence type IV pilus minor pilin ComGD Machinery gene
  MUA45_RS08680 (MUA45_08675) comGC 1736153..1736464 (-) 312 WP_000472257.1 competence type IV pilus major pilin ComGC Machinery gene
  MUA45_RS08685 (MUA45_08680) comGB 1736478..1737548 (-) 1071 WP_000776412.1 competence type IV pilus assembly protein ComGB Machinery gene
  MUA45_RS08690 (MUA45_08685) comGA 1737520..1738494 (-) 975 WP_061824406.1 competence type IV pilus ATPase ComGA Machinery gene
  MUA45_RS08695 (MUA45_08690) - 1738547..1739170 (-) 624 WP_001223008.1 MBL fold metallo-hydrolase -
  MUA45_RS08700 (MUA45_08695) - 1739167..1739496 (-) 330 WP_001018871.1 MTH1187 family thiamine-binding protein -
  MUA45_RS08705 (MUA45_08700) - 1739496..1740482 (-) 987 WP_000161314.1 ROK family glucokinase -
  MUA45_RS08710 (MUA45_08705) - 1740479..1740682 (-) 204 WP_000087561.1 YqgQ family protein -

Sequence


Protein


Download         Length: 99 a.a.        Molecular weight: 11093.20 Da        Isoelectric Point: 9.9215

>NTDB_id=672124 MUA45_RS08670 WP_000844413.1 1735443..1735742(-) (comGE) [Staphylococcus aureus strain IVB6215]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY

Nucleotide


Download         Length: 300 bp        

>NTDB_id=672124 MUA45_RS08670 WP_000844413.1 1735443..1735742(-) (comGE) [Staphylococcus aureus strain IVB6215]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB X5E258

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGE Staphylococcus aureus MW2

86.842

100

1

  comGE Staphylococcus aureus N315

98.99

100

0.99