Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   OIE75_RS11730 Genome accession   NZ_CP109171
Coordinates   2502795..2504528 (+) Length   577 a.a.
NCBI ID   WP_329470698.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01723     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2497795..2509528
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIE75_RS11690 (OIE75_11715) - 2497993..2498463 (-) 471 WP_307011878.1 MarR family winged helix-turn-helix transcriptional regulator -
  OIE75_RS11695 (OIE75_11720) - 2498575..2499132 (+) 558 WP_307011880.1 quercetin 2,3-dioxygenase -
  OIE75_RS11700 (OIE75_11725) - 2499129..2500025 (+) 897 WP_329470695.1 alpha/beta hydrolase -
  OIE75_RS11720 (OIE75_11745) - 2500841..2501146 (+) 306 WP_307011884.1 YtxH domain-containing protein -
  OIE75_RS11725 (OIE75_11750) - 2501202..2502656 (+) 1455 WP_307011885.1 FGGY family carbohydrate kinase -
  OIE75_RS11730 (OIE75_11755) rcrP 2502795..2504528 (+) 1734 WP_329470698.1 ABC transporter ATP-binding protein Regulator
  OIE75_RS11735 (OIE75_11760) rcrQ 2504528..2506456 (+) 1929 WP_329470700.1 ABC transporter ATP-binding protein Regulator
  OIE75_RS11740 (OIE75_11765) - 2506585..2508090 (+) 1506 WP_307011890.1 APC family permease -
  OIE75_RS11745 (OIE75_11770) - 2508092..2508508 (+) 417 WP_122620250.1 universal stress protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62487.66 Da        Isoelectric Point: 5.9749

>NTDB_id=671952 OIE75_RS11730 WP_329470698.1 2502795..2504528(+) (rcrP) [Streptomyces sp. NBC_01723]
MLIRLLRTHLRPYKKPIALLVALQFLQTCASLYLPTLNADIIDNGVVKGDSGYILSYGALMIGISLAQVVCNIGAVYYGA
RTAAALGRDVRGAVFGRVQSFSARELGGFGAPSLITRTTNDVQQVQMLALMTFTLMVSAPIMCVGGIVMALGLDVPLSGV
LVAVVPVLAVCVTLIVRRLRPLFRAMQVRLDTVNRVLREQITGNRVIRAFVRDEYEQQRFRKANTDLTEVALGTGNLLAL
MFPVVMTVVNLSSIAVVWFGAHRIDSGGMQIGDLTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLDTESSVVP
PVAPVTELRRHGHLEIRGAGFRYPGAEEPVLRNIELVARPGETTAVIGSTGSGKSTLLGLVPRLFDATDGEVLVDGVDVR
TVDPKVLAKVVGLVPQKPYLFAGTVATNLRYGNPDATDEELWHALDVAQAKEFVSELEGGLDAPVAQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAELGRETAEATVVIVAQRVATIRDADRIVVLDEGRVVGVGRHHELMADN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=671952 OIE75_RS11730 WP_329470698.1 2502795..2504528(+) (rcrP) [Streptomyces sp. NBC_01723]
GTGCTCATACGACTTTTGCGGACCCATCTCAGGCCCTACAAGAAACCCATCGCCCTGCTGGTGGCGCTGCAGTTCCTGCA
GACCTGCGCGTCGCTGTACCTGCCGACCCTGAACGCGGACATCATCGACAACGGTGTCGTGAAGGGGGACTCGGGCTACA
TCCTGAGCTACGGCGCCCTGATGATCGGCATCTCCCTGGCCCAGGTGGTGTGCAACATCGGCGCCGTCTACTACGGCGCG
CGCACGGCCGCCGCCCTCGGCCGGGACGTGCGGGGTGCGGTCTTCGGCCGGGTGCAGTCCTTCTCGGCGCGCGAGCTGGG
CGGCTTCGGCGCGCCCTCGCTGATCACCCGGACGACCAACGACGTGCAGCAGGTCCAGATGCTCGCCCTGATGACGTTCA
CGCTGATGGTGTCGGCGCCCATCATGTGCGTCGGCGGCATCGTGATGGCGCTCGGTCTGGACGTGCCGCTGTCCGGGGTG
CTGGTCGCGGTCGTGCCGGTGCTGGCGGTCTGCGTCACGCTGATCGTGCGGCGGCTGCGCCCGCTGTTCCGGGCGATGCA
GGTGCGGCTGGACACCGTCAACCGGGTGCTGCGCGAGCAGATCACCGGCAACCGCGTGATCCGCGCCTTCGTGCGGGACG
AGTACGAGCAGCAGCGCTTCCGGAAGGCCAACACCGACCTCACCGAGGTGGCGCTGGGCACCGGCAACCTGCTCGCGCTG
ATGTTCCCGGTGGTGATGACGGTGGTGAACCTGTCGTCGATCGCCGTGGTGTGGTTCGGCGCCCACCGGATCGACAGCGG
CGGGATGCAGATCGGCGACCTGACCGCGTTCCTCGCCTATCTGATGCAGATCGTCATGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCGGAGGTGTGCGCCGAGCGCATCCAGGAGGTCCTGGACACCGAGAGCAGCGTGGTGCCG
CCGGTGGCGCCGGTCACCGAGCTGCGCCGGCACGGGCATCTGGAGATCCGCGGGGCGGGCTTCCGCTACCCGGGGGCCGA
GGAGCCGGTGCTCAGGAACATCGAGCTGGTCGCCAGGCCGGGCGAGACGACCGCCGTCATCGGCTCGACCGGCAGCGGCA
AGTCGACCCTGCTCGGGCTGGTCCCCCGGCTCTTCGACGCCACCGACGGGGAGGTGCTGGTCGACGGGGTGGACGTACGG
ACCGTCGATCCGAAGGTGCTGGCCAAGGTCGTGGGTCTGGTGCCGCAGAAGCCGTACCTCTTCGCGGGCACCGTGGCGAC
CAACCTGCGCTACGGGAATCCGGACGCCACGGACGAGGAGCTGTGGCACGCCCTGGATGTGGCGCAGGCCAAGGAGTTCG
TCTCCGAGCTGGAGGGCGGTCTCGACGCGCCGGTCGCGCAGGGCGGCACCAACGTGTCGGGCGGCCAGCGGCAGCGGCTC
GCCATCGCCCGGACGCTGGTCCAGCGTCCGGAGATCTACCTCTTCGACGACTCTTTCTCCGCGCTCGACTACGCCACCGA
CGCGGCGCTGCGGGCCGAGCTGGGCCGGGAGACGGCCGAGGCGACCGTGGTGATCGTCGCGCAGCGGGTGGCGACCATCC
GGGACGCGGACCGCATCGTGGTGCTGGACGAGGGCCGGGTGGTCGGCGTGGGCCGGCACCACGAGCTGATGGCGGACAAC
GAGACCTACCGGGAGATCGTGCTCTCCCAGCTGACGGAAGCGGAGGCCGCCTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(351-498)

ABC transporter transmembrane region (ABC_membrane)

(19-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.076

97.574

0.381