Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | MUA70_RS06330 | Genome accession | NZ_CP094731 |
| Coordinates | 1317113..1318180 (+) | Length | 355 a.a. |
| NCBI ID | WP_002446533.1 | Uniprot ID | - |
| Organism | Staphylococcus epidermidis strain IVB6208 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1312113..1323180
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUA70_RS06300 (MUA70_06275) | - | 1312531..1313991 (+) | 1461 | WP_002457727.1 | rhomboid family intramembrane serine protease | - |
| MUA70_RS06305 (MUA70_06280) | - | 1313975..1314175 (+) | 201 | WP_002446537.1 | YqgQ family protein | - |
| MUA70_RS06310 (MUA70_06285) | - | 1314175..1315161 (+) | 987 | WP_002496885.1 | ROK family glucokinase | - |
| MUA70_RS06315 (MUA70_06290) | - | 1315161..1315487 (+) | 327 | WP_001831234.1 | MTH1187 family thiamine-binding protein | - |
| MUA70_RS06320 (MUA70_06295) | - | 1315487..1316110 (+) | 624 | WP_002446535.1 | MBL fold metallo-hydrolase | - |
| MUA70_RS06325 (MUA70_06300) | comGA | 1316167..1317141 (+) | 975 | WP_002446534.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| MUA70_RS06330 (MUA70_06305) | comGB | 1317113..1318180 (+) | 1068 | WP_002446533.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| MUA70_RS06335 (MUA70_06310) | comGC | 1318198..1318515 (+) | 318 | WP_002446532.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| MUA70_RS06340 (MUA70_06315) | comGD | 1318505..1318942 (+) | 438 | WP_002446531.1 | competence type IV pilus minor pilin ComGD | - |
| MUA70_RS06345 (MUA70_06320) | - | 1318929..1319222 (+) | 294 | WP_002446530.1 | hypothetical protein | - |
| MUA70_RS06350 (MUA70_06325) | comGF | 1319146..1319637 (+) | 492 | WP_002446529.1 | competence type IV pilus minor pilin ComGF | - |
| MUA70_RS06355 (MUA70_06330) | - | 1319802..1320314 (+) | 513 | WP_002457723.1 | shikimate kinase | - |
| MUA70_RS06360 (MUA70_06335) | gcvT | 1320532..1321623 (+) | 1092 | WP_002457722.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MUA70_RS06365 (MUA70_06340) | gcvPA | 1321643..1322989 (+) | 1347 | WP_002446526.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 42350.56 Da Isoelectric Point: 10.0598
>NTDB_id=671503 MUA70_RS06330 WP_002446533.1 1317113..1318180(+) (comGB) [Staphylococcus epidermidis strain IVB6208]
MKKLSINTFKYKRNKYLTEIQSINLLQRLHQLLSHGFTLYQSFKFLNSYFKYKERTINEKIIQHLQNGATCYDILKMIGY
PELVLLQIKFAENYGNIDEALVDTVQYMKRNLKAKKRLIKTLQYPVALISIFLFILTILNITVIPQFQQLYETMNVKLST
FQNLLTLIITLLPKLTFIFIFMSGIAFFITYKFYYYLPIERKLKSILKIPMINTYYKIYRTYQLSNQLSLFYRNGTSLQQ
IVQIYRNEQDNEFLKFLGNCLFKEANRGLPLPTILMNLQCFQNDLIKFIEQGEKNGKLDIELKLYSQMLLQQFEEKVLKQ
TKFIQPIIFFILGIFIVSLYLVIMLPMFELMQTIK
MKKLSINTFKYKRNKYLTEIQSINLLQRLHQLLSHGFTLYQSFKFLNSYFKYKERTINEKIIQHLQNGATCYDILKMIGY
PELVLLQIKFAENYGNIDEALVDTVQYMKRNLKAKKRLIKTLQYPVALISIFLFILTILNITVIPQFQQLYETMNVKLST
FQNLLTLIITLLPKLTFIFIFMSGIAFFITYKFYYYLPIERKLKSILKIPMINTYYKIYRTYQLSNQLSLFYRNGTSLQQ
IVQIYRNEQDNEFLKFLGNCLFKEANRGLPLPTILMNLQCFQNDLIKFIEQGEKNGKLDIELKLYSQMLLQQFEEKVLKQ
TKFIQPIIFFILGIFIVSLYLVIMLPMFELMQTIK
Nucleotide
Download Length: 1068 bp
>NTDB_id=671503 MUA70_RS06330 WP_002446533.1 1317113..1318180(+) (comGB) [Staphylococcus epidermidis strain IVB6208]
GTGAAGAAGTTGTCGATAAATACATTTAAATATAAGAGGAATAAATATCTTACTGAAATACAATCAATAAACTTATTACA
GAGATTACATCAGCTTTTAAGTCACGGATTCACTTTATATCAAAGTTTTAAATTTTTAAACTCTTATTTTAAATATAAAG
AACGAACAATAAATGAAAAGATTATCCAACATCTACAAAACGGCGCTACATGTTATGATATTTTAAAAATGATAGGGTAT
CCAGAATTAGTTCTTCTTCAAATAAAATTTGCTGAAAACTACGGTAACATTGATGAGGCTCTCGTTGATACTGTTCAATA
TATGAAAAGAAATTTGAAAGCTAAAAAACGACTCATCAAAACCTTACAATATCCTGTTGCATTAATTTCTATCTTCTTAT
TCATATTAACCATTTTAAATATAACTGTCATACCTCAATTTCAACAACTTTATGAGACTATGAATGTTAAATTATCAACA
TTTCAAAATCTACTAACTCTTATTATTACCCTTCTTCCCAAGCTAACTTTCATTTTTATCTTTATGAGTGGTATAGCATT
TTTTATCACTTATAAATTTTACTATTATCTACCAATTGAGAGAAAATTAAAATCTATTTTAAAAATCCCAATGATTAATA
CGTATTATAAAATATATAGAACTTATCAACTTTCCAATCAGCTTTCTTTATTTTACAGAAATGGTACAAGTCTTCAACAA
ATTGTCCAAATATATCGTAATGAGCAAGATAACGAATTTCTTAAATTTCTGGGTAATTGTCTTTTTAAAGAAGCTAATAG
AGGGCTCCCGTTACCTACTATATTAATGAATCTACAATGTTTTCAAAATGATTTAATTAAATTCATAGAACAAGGAGAGA
AAAATGGAAAATTAGATATAGAATTAAAATTATACAGTCAAATGTTATTACAGCAATTTGAGGAAAAAGTGTTAAAACAA
ACAAAATTTATACAACCTATCATCTTCTTTATCTTGGGAATTTTTATTGTATCTTTATACTTAGTCATTATGCTTCCTAT
GTTCGAACTTATGCAAACAATAAAATAA
GTGAAGAAGTTGTCGATAAATACATTTAAATATAAGAGGAATAAATATCTTACTGAAATACAATCAATAAACTTATTACA
GAGATTACATCAGCTTTTAAGTCACGGATTCACTTTATATCAAAGTTTTAAATTTTTAAACTCTTATTTTAAATATAAAG
AACGAACAATAAATGAAAAGATTATCCAACATCTACAAAACGGCGCTACATGTTATGATATTTTAAAAATGATAGGGTAT
CCAGAATTAGTTCTTCTTCAAATAAAATTTGCTGAAAACTACGGTAACATTGATGAGGCTCTCGTTGATACTGTTCAATA
TATGAAAAGAAATTTGAAAGCTAAAAAACGACTCATCAAAACCTTACAATATCCTGTTGCATTAATTTCTATCTTCTTAT
TCATATTAACCATTTTAAATATAACTGTCATACCTCAATTTCAACAACTTTATGAGACTATGAATGTTAAATTATCAACA
TTTCAAAATCTACTAACTCTTATTATTACCCTTCTTCCCAAGCTAACTTTCATTTTTATCTTTATGAGTGGTATAGCATT
TTTTATCACTTATAAATTTTACTATTATCTACCAATTGAGAGAAAATTAAAATCTATTTTAAAAATCCCAATGATTAATA
CGTATTATAAAATATATAGAACTTATCAACTTTCCAATCAGCTTTCTTTATTTTACAGAAATGGTACAAGTCTTCAACAA
ATTGTCCAAATATATCGTAATGAGCAAGATAACGAATTTCTTAAATTTCTGGGTAATTGTCTTTTTAAAGAAGCTAATAG
AGGGCTCCCGTTACCTACTATATTAATGAATCTACAATGTTTTCAAAATGATTTAATTAAATTCATAGAACAAGGAGAGA
AAAATGGAAAATTAGATATAGAATTAAAATTATACAGTCAAATGTTATTACAGCAATTTGAGGAAAAAGTGTTAAAACAA
ACAAAATTTATACAACCTATCATCTTCTTTATCTTGGGAATTTTTATTGTATCTTTATACTTAGTCATTATGCTTCCTAT
GTTCGAACTTATGCAAACAATAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Staphylococcus aureus MW2 |
48.596 |
100 |
0.487 |
| comGB | Staphylococcus aureus N315 |
48.596 |
100 |
0.487 |