Detailed information NTG0671330

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: MUA53_RS05625
• Genome accession: NZ_CP094724
• Coordinates: 1125751..1128174 (+)
• Length: 807 a.a.
• NCBI ID: WP_155975605.1
• Uniprot ID: -
• Organism: Staphylococcus hominis strain IVB6247
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1120751..1133174

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUA53_RS05595 (MUA53_05580)	cymR	1120758..1121180 (+)	423	WP_002448977.1	cysteine metabolism transcriptional regulator CymR	-
MUA53_RS05600 (MUA53_05585)	-	1121290..1121433 (+)	144	WP_017176172.1	SAS049 family protein	-
MUA53_RS05605 (MUA53_05590)	-	1121532..1122536 (-)	1005	WP_049336022.1	LLM class flavin-dependent oxidoreductase	-
MUA53_RS05610 (MUA53_05595)	-	1122736..1123875 (+)	1140	WP_155975603.1	cysteine desulfurase family protein	-
MUA53_RS05615 (MUA53_05600)	mnmA	1123879..1124991 (+)	1113	WP_064207356.1	tRNA 2-thiouridine(34) synthase MnmA	-
MUA53_RS05620 (MUA53_05605)	-	1125078..1125749 (+)	672	WP_262617567.1	tetratricopeptide repeat protein	-
MUA53_RS05625 (MUA53_05610)	recD2	1125751..1128174 (+)	2424	WP_155975605.1	ATP-dependent RecD-like DNA helicase	Machinery gene
MUA53_RS05630 (MUA53_05615)	alaS	1128454..1131084 (+)	2631	WP_155975606.1	alanine--tRNA ligase	-
MUA53_RS05635 (MUA53_05620)	-	1131149..1131409 (+)	261	WP_002448947.1	IreB family regulatory phosphoprotein	-
MUA53_RS05640 (MUA53_05625)	ruvX	1131410..1131838 (+)	429	WP_002455257.1	Holliday junction resolvase RuvX	-
MUA53_RS05645 (MUA53_05630)	-	1131853..1132161 (+)	309	WP_064207352.1	DUF1292 domain-containing protein	-
MUA53_RS05650 (MUA53_05635)	-	1132421..1133056 (+)	636	WP_002448992.1	O-methyltransferase	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 91707.29 Da
• Isoelectric Point: 4.8582

>NTDB_id=671330 MUA53_RS05625 WP_155975605.1 1125751..1128174(+) (recD2) [Staphylococcus hominis strain IVB6247]
MPNPTLFDYSMVKGTVDTILFQNKDNFYTVLKVDSIETNESFDNLPTVVGFFPNIVEGDVYTFKGQIVQHPRYGKQLKAE
TFEKELPQTKDAIISYLSSDLFKGIGKKTAQNIVNTLGENAINDILTDPSVLENVPSLAKTKQKQIVEQISANQESEKIM
IRLHDLGFGPKLSMAIYQFYQSETLKVLENNPYQLVYDVKGIGFQKADTLARNNGIAYNDSERLKAGLLYTLEEECIKQG
HTYLDENAVLEITEDMLSDKHLDETIEQQQLKHVLQTLFEEKKIILKNSHVAIPSLYYSELKSVQNLYRIKTYKNHFKII
EQSDLQIHIGELEDQNNVNYAKSQQEALETAMNSKIMLLTGGPGTGKTTVIKGIVELYAEIHGLSLKYSDYQEDDYPIVL
AAPTGRASKRLQESTGLEAMTIHRLIGWNQDTQPEDILENEIKAKLIIIDEMSMVDSWLFHQFLSAVPLDAQIILVGDED
QLPSVGPGQVFKDLIESKAFPRVNLTEVYRQQDGSSIIDLAHRMKHHEPIDITKRYHDRSFIHCNVEQIPTVVEKVVSSA
VNKGYDMSDIQVLAPMYKGSAGIKRLNQVLQNILNPKEKDTREIEFGDITFRKGDKVLQLVNRPNDNIFNGDIGVIVGIF
WAKENALNKDVLVVDFEGNEITFTRQDLLELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKQSLVL
LGDPKAFDIALNTQGQERHTQLKTLIINYFGMSQVNIDVEENDEQINIDDKDDNNAVEHITLSEETIYQINPMINMGNVS
PYDFVEH

Nucleotide

• Length: 2424 bp

>NTDB_id=671330 MUA53_RS05625 WP_155975605.1 1125751..1128174(+) (recD2) [Staphylococcus hominis strain IVB6247]
ATGCCAAACCCTACACTATTTGATTACTCAATGGTTAAAGGAACAGTTGATACCATTCTATTTCAAAATAAAGATAACTT
TTATACTGTTTTAAAAGTAGATTCCATTGAAACTAATGAATCATTTGATAATCTGCCTACAGTTGTAGGGTTTTTTCCTA
ATATTGTTGAAGGAGATGTCTATACGTTTAAAGGACAAATTGTTCAACATCCTCGTTATGGTAAACAACTTAAAGCTGAA
ACATTTGAAAAAGAATTGCCTCAAACTAAAGATGCCATTATAAGTTATTTATCTAGTGACTTATTTAAAGGTATTGGTAA
AAAGACTGCTCAGAATATTGTAAATACATTAGGAGAAAATGCAATAAATGATATTTTAACTGATCCTTCTGTTCTTGAAA
ATGTTCCTAGTTTAGCAAAAACGAAACAAAAACAGATTGTAGAACAGATTAGTGCAAATCAAGAATCAGAAAAAATAATG
ATTCGCTTACATGACTTAGGTTTTGGTCCAAAATTATCTATGGCGATTTATCAATTCTATCAATCAGAGACTTTAAAAGT
TTTAGAAAACAATCCATACCAATTAGTTTATGATGTAAAAGGTATTGGTTTTCAAAAAGCTGATACATTAGCTAGAAATA
ATGGTATTGCTTATAACGATTCAGAACGTTTAAAAGCTGGATTATTATATACTCTTGAAGAAGAATGTATAAAACAGGGG
CATACGTATTTAGATGAAAATGCTGTATTAGAAATTACAGAAGATATGCTTTCAGATAAGCATTTAGATGAAACAATTGA
ACAACAACAATTAAAACATGTACTACAAACACTTTTTGAAGAAAAGAAAATTATTTTAAAGAATAGTCATGTTGCGATTC
CAAGTTTATACTATTCAGAACTTAAAAGTGTTCAAAATTTGTATCGTATCAAAACATACAAAAATCACTTTAAAATAATA
GAGCAATCAGATTTACAGATACATATTGGTGAACTAGAAGATCAAAATAATGTTAATTATGCTAAATCACAACAAGAAGC
ACTTGAAACGGCGATGAATTCGAAAATAATGTTACTGACTGGAGGTCCAGGAACAGGTAAGACAACTGTTATTAAAGGGA
TTGTAGAATTATATGCTGAAATTCATGGTCTATCTCTTAAGTATTCTGATTATCAAGAAGATGATTATCCAATCGTATTA
GCCGCCCCAACTGGAAGAGCATCAAAGCGTTTACAAGAATCAACTGGCTTAGAGGCAATGACGATTCATCGATTAATAGG
ATGGAATCAAGATACTCAACCAGAAGATATTCTTGAGAATGAAATTAAAGCTAAGCTCATTATAATTGATGAAATGTCAA
TGGTTGATTCTTGGTTGTTCCACCAATTTTTAAGTGCCGTTCCACTAGATGCACAAATCATTCTAGTAGGGGATGAAGAT
CAATTGCCATCTGTCGGTCCTGGCCAAGTATTTAAGGATTTAATTGAGTCTAAAGCATTTCCAAGAGTTAATTTAACTGA
AGTTTATCGCCAACAAGATGGTTCTAGCATTATTGACTTAGCGCATCGCATGAAACATCATGAGCCAATAGATATTACAA
AACGTTATCATGATAGAAGTTTTATTCATTGTAATGTAGAACAAATTCCAACTGTAGTGGAGAAAGTAGTATCTAGCGCT
GTAAACAAAGGATATGATATGAGTGATATTCAAGTTTTAGCACCTATGTACAAAGGAAGTGCAGGGATAAAAAGACTTAA
TCAAGTATTACAAAATATTTTAAATCCTAAAGAAAAAGATACAAGAGAAATAGAGTTTGGCGATATAACGTTTAGAAAAG
GAGACAAAGTTTTACAACTAGTCAATCGACCCAATGACAATATTTTTAATGGTGATATTGGCGTCATAGTAGGTATATTT
TGGGCTAAAGAAAATGCACTTAATAAAGATGTACTGGTTGTCGATTTTGAAGGAAATGAAATTACATTTACTAGACAAGA
TTTATTAGAACTCACACATGCTTATTGTACCTCAATCCATAAATCACAAGGGTCAGAATTTCCTATTGTCATTATGCCTA
TTGTCAAACAATATTTTAGAATGTTGCAAAGACCTATTTTATATACAGGTCTGACACGTGCAAAACAATCTTTAGTACTA
TTAGGAGATCCAAAGGCATTTGACATTGCCTTAAATACGCAAGGTCAAGAAAGACATACACAATTAAAAACACTAATTAT
AAATTATTTTGGTATGAGTCAGGTTAATATAGATGTAGAAGAGAATGATGAACAGATAAATATAGATGATAAAGATGATA
ATAATGCAGTTGAACACATTACTTTAAGTGAAGAAACAATTTATCAAATTAATCCAATGATTAATATGGGAAATGTTTCG
CCTTACGACTTTGTTGAACATTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• AAA domain (AAA_30) (340-545)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-721)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (586-656)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.502	99.628	0.493