Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   OIE61_RS13765 Genome accession   NZ_CP109122
Coordinates   3026979..3028712 (+) Length   577 a.a.
NCBI ID   WP_326817023.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01762     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3021979..3033712
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIE61_RS13735 (OIE61_13750) - 3023430..3023621 (-) 192 WP_267005305.1 hypothetical protein -
  OIE61_RS13755 (OIE61_13770) - 3024997..3025302 (+) 306 WP_326608456.1 YtxH domain-containing protein -
  OIE61_RS13760 (OIE61_13775) - 3025363..3026808 (+) 1446 WP_326817022.1 FGGY family carbohydrate kinase -
  OIE61_RS13765 (OIE61_13780) rcrP 3026979..3028712 (+) 1734 WP_326817023.1 ABC transporter ATP-binding protein Regulator
  OIE61_RS13770 (OIE61_13785) rcrQ 3028712..3030637 (+) 1926 WP_326630526.1 ABC transporter ATP-binding protein Regulator
  OIE61_RS13775 (OIE61_13790) - 3030654..3031781 (-) 1128 WP_326630524.1 RNA polymerase sigma factor -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62808.83 Da        Isoelectric Point: 5.3818

>NTDB_id=671148 OIE61_RS13765 WP_326817023.1 3026979..3028712(+) (rcrP) [Streptomyces sp. NBC_01762]
MLIKLLRACLGPYKKPIMLLVALQLLQTCATLYLPSLNADIIDNGVVEGDTGYILTYGGIMIAVSIAQVVCNTGAVFYGA
RTAAALGRDVRASVFDRVQSFSAREVGRFGAPSLITRTTNDVQQVQMLVLMTFTMMVSAPIMCVGGIIMALGQDVPLSAV
LLAVVPVLGIAVSLIVRRMRPLFRTMQERLDTVNRVLREQITGNRVIRAFVRDGYEEKRFRGANTELTDVALSTGRLMAL
MFPTVMTVVNVSSIAVVWFGAHRIDSGGMEIGALTAFLSYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLETDSSVVP
PVEPVRELRAHGHLEVRAADFRYPGAEEPVLRSVDLVARPGETTAIIGSTGSGKSTLLGLVPRLFDVTDGHVLVDGADVR
TLEPTLLAKTVSLVPQKPYLFSGTVATNLRYGNPDATDEELWHALEVAQAKEFVEELEHGLHAPIAQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRRALSQETAESTVVIVAQRVSTIRDADRILVLDEGRVVGSGTHHELMDGN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=671148 OIE61_RS13765 WP_326817023.1 3026979..3028712(+) (rcrP) [Streptomyces sp. NBC_01762]
GTGCTCATAAAACTCCTGCGGGCCTGTCTCGGCCCGTACAAGAAACCGATCATGCTGTTGGTGGCTCTCCAGCTGCTGCA
GACCTGCGCCACTCTCTATCTCCCCTCTCTCAACGCCGACATCATTGACAACGGTGTCGTCGAGGGGGACACCGGCTACA
TCCTGACGTACGGCGGCATCATGATCGCCGTCTCCATCGCCCAGGTCGTCTGCAACACGGGGGCCGTCTTCTACGGTGCG
CGAACTGCGGCCGCACTGGGCCGGGATGTCCGGGCGTCGGTCTTCGACCGGGTTCAGTCGTTCTCGGCACGTGAGGTCGG
GCGCTTCGGGGCACCCTCGCTGATCACCCGTACGACCAATGACGTCCAGCAGGTCCAGATGCTGGTCCTGATGACGTTCA
CCATGATGGTCTCGGCGCCGATCATGTGTGTCGGCGGCATCATCATGGCGCTCGGCCAGGACGTTCCGCTGTCGGCGGTG
CTGCTCGCGGTGGTGCCGGTGCTCGGCATCGCGGTGAGTCTCATCGTGCGGCGGATGCGGCCGCTGTTCCGCACGATGCA
GGAGCGGCTCGACACGGTGAACCGGGTGCTGCGCGAGCAGATCACCGGCAACCGGGTCATCCGCGCATTCGTCCGCGACG
GGTACGAGGAGAAGCGGTTCCGGGGCGCCAACACCGAGTTGACCGATGTGGCGCTCTCCACCGGGCGTCTGATGGCGCTG
ATGTTCCCGACCGTGATGACGGTCGTGAACGTGTCGTCGATCGCCGTGGTCTGGTTCGGTGCGCACCGGATCGACAGCGG
CGGGATGGAGATCGGCGCGCTGACCGCGTTCCTCTCCTACCTGATGCAGATCGTCATGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCCGAGGTGTGTGCCGAGCGCATCCAGGAAGTGCTGGAGACCGATTCGAGCGTGGTGCCG
CCGGTCGAGCCTGTGCGGGAGCTGCGCGCCCACGGCCATCTGGAGGTGCGGGCTGCGGACTTCCGCTACCCGGGCGCCGA
GGAGCCGGTGTTGCGGTCGGTGGATCTGGTGGCGCGGCCCGGTGAGACGACCGCGATCATCGGGTCGACGGGCAGCGGGA
AGTCGACGCTGCTCGGTCTCGTACCGCGGCTGTTCGATGTGACGGACGGTCACGTACTGGTCGACGGCGCGGACGTACGG
ACGCTGGAGCCGACGCTGCTGGCGAAGACGGTGAGTCTGGTTCCGCAGAAGCCGTATCTGTTCTCCGGGACGGTCGCGAC
GAATCTGCGGTACGGAAACCCGGACGCGACCGACGAGGAGCTGTGGCACGCGCTGGAGGTCGCGCAGGCCAAGGAGTTCG
TCGAGGAGCTGGAGCACGGGCTGCACGCGCCGATCGCGCAGGGCGGCACCAATGTCTCCGGCGGGCAGCGGCAGCGACTC
GCGATCGCGAGGACGCTGGTGCAGCGACCGGAGATCTATCTCTTCGACGACTCGTTCTCCGCGCTCGACTATGCGACGGA
TGCCGCGCTGCGCCGGGCACTGTCGCAGGAGACTGCCGAGTCGACCGTGGTGATCGTGGCTCAGCGGGTGTCCACCATCC
GTGACGCGGACCGGATCCTGGTGCTCGACGAGGGCCGGGTCGTCGGCTCCGGTACCCATCACGAGCTGATGGACGGCAAT
GAAACCTACCGGGAGATCGTGCTCTCCCAGCTGACGGAAGCGGAGGCCGCGTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(18-288)

ABC transporter (ABC_tran)

(352-498)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.271

100

0.412