Detailed information NTG0670879

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: MUA28_RS06515
• Genome accession: NZ_CP094707
• Coordinates: 1373751..1376165 (+)
• Length: 804 a.a.
• NCBI ID: WP_262570397.1
• Uniprot ID: -
• Organism: Staphylococcus simulans strain IVB6192
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1368751..1381165

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUA28_RS06490 (MUA28_06465)	-	1369231..1369437 (+)	207	WP_002481109.1	CsbD family protein	-
MUA28_RS06495 (MUA28_06470)	-	1369534..1370538 (-)	1005	WP_002481108.1	LLM class flavin-dependent oxidoreductase	-
MUA28_RS06500 (MUA28_06475)	-	1370721..1371863 (+)	1143	WP_002481107.1	cysteine desulfurase family protein	-
MUA28_RS06505 (MUA28_06480)	mnmA	1371866..1372978 (+)	1113	WP_002481106.1	tRNA 2-thiouridine(34) synthase MnmA	-
MUA28_RS06510 (MUA28_06485)	-	1373080..1373748 (+)	669	WP_262570395.1	tetratricopeptide repeat protein	-
MUA28_RS06515 (MUA28_06490)	recD2	1373751..1376165 (+)	2415	WP_262570397.1	ATP-dependent RecD-like DNA helicase	Machinery gene
MUA28_RS06520 (MUA28_06495)	alaS	1376477..1379107 (+)	2631	WP_262570400.1	alanine--tRNA ligase	-
MUA28_RS06525 (MUA28_06500)	-	1379176..1379439 (+)	264	WP_023015119.1	IreB family regulatory phosphoprotein	-
MUA28_RS06530 (MUA28_06505)	ruvX	1379443..1379868 (+)	426	WP_002481101.1	Holliday junction resolvase RuvX	-
MUA28_RS06535 (MUA28_06510)	-	1379893..1380204 (+)	312	WP_002481100.1	DUF1292 domain-containing protein	-
MUA28_RS06540 (MUA28_06515)	-	1380447..1381088 (+)	642	WP_262570402.1	O-methyltransferase	-

Sequence

Protein

• Length: 804 a.a.
• Molecular weight: 90603.99 Da
• Isoelectric Point: 4.5315

>NTDB_id=670879 MUA28_RS06515 WP_262570397.1 1373751..1376165(+) (recD2) [Staphylococcus simulans strain IVB6192]
MENPTLFDYSMVKGTVEAILFQNKDNFYTVLKVDPIETNEDFDNMPTIVGFFPEIAEGDVYTFKGQAVTHPRYGKQLKAE
TFEKEVPQTKDAIISYLSSDLFKGVGKKTAENIVNTLGENTINKILDDRSVLEDVPNLSKKKQIQIADQIYSNQEVEKIM
IRLHDLGFGPKLAMSIYQVYQSDTLQTIEKNPYDLVYDVRGVGFHKADTLAKNLGIEYNAPERLKAGLLYTIEEECIKQG
HTFLPKDYVLETSLEMLSKGYDQTIDASMLEKMILELTEESKLVEADETLSIPSLYYSEVKSVQNLYRIASHQAKLENIE
QSDLQINIGEIEEMNGVNYASSQKEALETAINSKVMLLTGGPGTGKTTVIKGIVELYAETHGLSLSYDDYQEDDYPIALA
APTGRAAKRLQESTGLEAMTIHRLIGWSQDTKPEDVLENEITAKLIIIDEMSMVDTWLFHQFLNAVPIDAQIILVGDEDQ
LPSVGPGQVFKDLIDAKVIPRVNLTEVYRQQDGSSIIELAHKMKLGQSIDITERFHDRSFIPCTAEQIPDVVNKVVSSAV
KKGYDMSDIQVLAPMYRGSAGIKRLNKVLQDILNPKAEDAREIEFGESVFRKGDKVLQLVNRPNDNIFNGDIGVIVGIFW
ARENELNKDILVVDFEGNEITFTKQDMMELTHAYCTSIHKAQGSEFPIVIMPIVKQYYRMLQRPIIYTGLTRAKQSLVFL
GDSQAFDIGMKTHGQVRMTRLAQLLRDYFGHESETNEEQADEQTNDKTTSAPAQQLVELTEATIYEIDPMIGMGKVTPYT
FNHE

Nucleotide

• Length: 2415 bp

>NTDB_id=670879 MUA28_RS06515 WP_262570397.1 1373751..1376165(+) (recD2) [Staphylococcus simulans strain IVB6192]
TTGGAGAACCCTACATTGTTTGACTATTCGATGGTCAAAGGAACAGTAGAAGCAATCTTATTTCAAAATAAAGATAATTT
CTATACCGTATTAAAAGTAGATCCGATTGAAACCAATGAAGATTTTGATAATATGCCTACAATTGTGGGGTTCTTTCCTG
AAATTGCTGAAGGCGATGTTTATACCTTCAAAGGTCAAGCTGTGACACACCCTAGATACGGCAAACAATTAAAAGCTGAA
ACTTTCGAAAAAGAAGTACCGCAAACAAAAGATGCGATTATCAGTTACTTATCAAGTGATTTGTTTAAAGGTGTCGGTAA
GAAAACAGCTGAAAATATCGTAAATACACTTGGTGAAAATACCATCAATAAAATTTTAGATGATCGTTCAGTCCTAGAAG
ATGTACCGAATTTATCTAAAAAGAAACAAATTCAAATTGCAGATCAAATCTACAGTAATCAAGAAGTAGAAAAAATTATG
ATCAGACTTCATGATTTAGGCTTCGGTCCGAAATTAGCGATGAGCATCTATCAAGTTTATCAAAGTGACACCTTACAAAC
GATAGAGAAAAATCCATATGATCTTGTCTATGATGTACGTGGTGTCGGTTTCCATAAAGCAGATACTTTAGCTAAGAATT
TAGGCATAGAATATAACGCCCCTGAACGCTTAAAAGCAGGTCTGCTTTATACGATAGAAGAAGAATGTATTAAACAAGGT
CATACATTTTTACCTAAAGATTATGTATTAGAAACTTCGTTAGAGATGTTAAGCAAGGGATATGACCAAACGATAGATGC
CAGTATGTTAGAAAAAATGATACTTGAATTGACAGAAGAAAGTAAGTTGGTGGAAGCGGATGAAACACTTTCTATCCCAA
GCTTATATTATTCAGAAGTCAAAAGTGTGCAGAACCTGTATCGTATTGCGTCACATCAAGCTAAATTAGAGAATATTGAA
CAATCTGACTTACAAATCAATATTGGTGAAATCGAGGAAATGAATGGAGTCAACTACGCATCTTCTCAAAAAGAAGCACT
TGAAACAGCGATTAATTCAAAAGTCATGCTGCTGACAGGTGGTCCAGGTACCGGTAAAACAACGGTTATCAAAGGCATCG
TTGAACTCTATGCGGAAACGCATGGTTTATCTTTATCCTATGACGATTACCAAGAAGATGATTATCCGATAGCGCTTGCT
GCACCTACAGGACGTGCAGCCAAACGTTTACAAGAATCGACTGGACTTGAAGCAATGACTATCCACCGTTTAATCGGCTG
GAGTCAAGATACCAAACCTGAAGATGTCTTAGAAAATGAAATTACTGCTAAGCTCATCATTATTGATGAAATGTCGATGG
TAGATACATGGTTGTTTCATCAGTTCTTAAATGCAGTACCGATTGATGCACAAATCATTTTAGTCGGAGATGAAGACCAA
TTACCATCAGTCGGTCCAGGACAAGTCTTTAAAGATTTAATTGATGCGAAAGTCATTCCACGTGTTAATTTAACTGAAGT
CTACCGTCAACAAGATGGTTCTAGTATCATTGAACTCGCACATAAAATGAAATTAGGTCAGTCGATAGACATTACTGAGC
GTTTCCATGATCGTAGCTTTATTCCTTGTACAGCTGAACAAATACCAGATGTAGTTAATAAAGTGGTGAGTTCTGCTGTA
AAAAAAGGCTACGATATGAGCGATATTCAAGTCTTGGCTCCGATGTATCGCGGCAGTGCCGGCATTAAGCGTTTAAATAA
AGTATTACAAGATATCTTGAATCCTAAAGCTGAAGATGCAAGAGAGATTGAGTTCGGAGAATCGGTCTTTAGAAAGGGCG
ACAAAGTCTTACAACTTGTGAATCGTCCTAATGATAATATTTTCAATGGTGATATCGGTGTGATTGTCGGTATCTTCTGG
GCACGGGAAAACGAATTAAATAAAGATATACTTGTCGTTGATTTCGAAGGCAATGAAATTACATTCACCAAACAAGATAT
GATGGAGTTAACACATGCTTATTGCACTTCCATTCATAAAGCACAAGGTTCAGAGTTTCCAATTGTTATTATGCCGATTG
TAAAACAATATTATCGCATGTTGCAGCGTCCGATTATCTATACAGGACTTACACGTGCCAAACAATCTTTAGTTTTTCTT
GGTGACAGCCAAGCCTTTGACATCGGTATGAAGACCCATGGCCAAGTTCGTATGACGAGACTCGCACAATTGCTCAGAGA
TTACTTTGGTCATGAGAGTGAAACAAATGAGGAACAAGCAGATGAACAAACAAATGACAAAACAACCTCAGCACCTGCAC
AACAACTCGTAGAATTAACAGAAGCAACGATTTATGAAATTGACCCGATGATTGGTATGGGTAAGGTCACACCTTATACT
TTTAATCATGAATAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-719)

• AAA domain (AAA_30) (339-544)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	52.432	92.04	0.483