Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   K5I26_RS07680 Genome accession   NZ_CP094681
Coordinates   1605332..1607176 (+) Length   614 a.a.
NCBI ID   WP_024733259.1    Uniprot ID   A0A3E3K037
Organism   Sellimonas intestinalis strain VE303-03     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1600332..1612176
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K5I26_RS07660 (K5I26_07660) - 1600558..1601556 (+) 999 WP_242843464.1 permease -
  K5I26_RS07665 (K5I26_07665) - 1601717..1602277 (+) 561 WP_024733262.1 hypothetical protein -
  K5I26_RS07670 (K5I26_07670) - 1602558..1603061 (+) 504 WP_024733261.1 MarR family winged helix-turn-helix transcriptional regulator -
  K5I26_RS07675 (K5I26_07675) - 1603084..1605339 (+) 2256 WP_024733260.1 ABC transporter ATP-binding protein -
  K5I26_RS07680 (K5I26_07680) rcrQ 1605332..1607176 (+) 1845 WP_024733259.1 ABC transporter ATP-binding protein Regulator
  K5I26_RS07685 (K5I26_07685) - 1607289..1608764 (-) 1476 WP_024733258.1 DUF1846 domain-containing protein -
  K5I26_RS07690 (K5I26_07690) ftsH 1609113..1611164 (+) 2052 WP_024733257.1 ATP-dependent zinc metalloprotease FtsH -

Sequence

Protein


Download         Length: 614 a.a.        Molecular weight: 68358.89 Da        Isoelectric Point: 6.8348

>NTDB_id=670651 K5I26_RS07680 WP_024733259.1 1605332..1607176(+) (rcrQ) [Sellimonas intestinalis strain VE303-03]
MSNQRRGPMGGHGRMGSGEKAKDFKGTLKRVLKYIGPYKFPILCVMLFAVGSTIFNIIGPKVLGKATTEIFTGLVGKVTG
GDGIDFGKIGRILITLLILYGVSSIFSFIQGFIMTGVTQKLTYRMRKDISEKINRLPMNYFDTKTHGEVLSRVTNDVDTF
SQSLNQTATQMITSVTTLIGVLVMMLSISPLMTMVALLILPISLVLISFIVKHSQKYFKNQQEYLGHVNGQVEEVYGGHS
IVKAFNKEDDVLKEFNEMNDVLYQTAWKSQFFSGMMMPIMQFVGNLGYVGVTILGGYLAIKQTIEVGDIQSFIQYVRNFT
QPIQQVAQVANMLQSMAAASERVFEFLEEEEEVQFADDPVSTEGLQGNVEFDHVKFGYNPDHIIIKDFSTKVKEGQKIAI
VGPTGAGKTTLIKLLMRFYDVNGGAILVDGHNVRDFNRGELRRMFGMVLQDTWLFNGSIRDNIRYGKLDATDEEIMEAAK
AAHAHHFIQTLPAGYDMELNEEASNVSQGQKQLLTIARAILADPKILILDEATSSVDTRTEIQIQKAMDNLMKGRTSFII
AHRLSTIRDADRILVLKDGDIVEQGRHEELLAKGGFYADLYNSQFENGSSKAAS

Nucleotide


Download         Length: 1845 bp        

>NTDB_id=670651 K5I26_RS07680 WP_024733259.1 1605332..1607176(+) (rcrQ) [Sellimonas intestinalis strain VE303-03]
ATGAGTAATCAAAGACGAGGACCGATGGGTGGCCACGGACGCATGGGCAGCGGTGAGAAAGCAAAAGATTTTAAAGGGAC
TCTCAAACGGGTGCTGAAATATATCGGACCATATAAGTTTCCGATTCTGTGTGTTATGCTCTTTGCTGTCGGCAGCACGA
TTTTCAATATTATCGGGCCGAAAGTGCTCGGTAAGGCGACAACGGAGATTTTTACGGGCTTGGTCGGCAAGGTGACAGGT
GGAGACGGTATTGATTTTGGCAAAATCGGCAGAATCCTGATTACTTTGCTGATCCTGTATGGTGTGAGCTCTATCTTCTC
ATTTATTCAGGGGTTTATTATGACGGGAGTTACACAGAAGCTTACGTACCGGATGAGGAAAGATATTTCAGAGAAGATCA
ACAGACTTCCAATGAATTATTTTGATACAAAGACCCATGGAGAAGTGCTCTCCCGTGTGACAAACGACGTCGATACGTTC
AGTCAGAGTCTCAACCAGACGGCGACCCAGATGATCACTTCGGTGACAACGCTGATCGGTGTACTTGTGATGATGCTAAG
TATCAGTCCGTTGATGACGATGGTGGCTCTTTTGATCCTCCCGATTTCGCTGGTTCTGATTTCTTTCATTGTGAAACATT
CTCAGAAATACTTTAAAAATCAGCAGGAATACCTGGGGCATGTCAATGGACAGGTGGAGGAAGTTTATGGCGGCCACAGT
ATTGTAAAGGCATTCAATAAGGAGGATGACGTCCTTAAAGAATTCAATGAGATGAACGATGTGCTCTATCAGACAGCTTG
GAAATCGCAGTTTTTCTCCGGAATGATGATGCCGATCATGCAGTTTGTCGGCAACCTGGGCTATGTGGGGGTGACGATCC
TTGGCGGATACCTGGCGATCAAACAGACGATCGAAGTCGGGGATATCCAGTCCTTTATCCAGTACGTTCGAAATTTCACT
CAGCCGATCCAGCAGGTGGCACAGGTAGCGAATATGTTACAGTCCATGGCAGCAGCTTCCGAGCGTGTGTTCGAGTTTTT
GGAGGAAGAGGAAGAGGTACAGTTTGCAGATGATCCAGTATCGACAGAAGGACTTCAAGGCAATGTGGAATTTGACCATG
TGAAATTCGGCTACAATCCAGATCATATCATCATCAAGGACTTCTCCACGAAAGTGAAGGAGGGACAGAAAATCGCGATT
GTCGGTCCGACCGGCGCCGGTAAGACGACACTGATTAAACTGCTGATGCGCTTTTATGATGTCAATGGAGGAGCGATCCT
TGTGGACGGACACAATGTCAGGGATTTCAACCGTGGAGAACTGCGCCGGATGTTCGGTATGGTGCTTCAGGATACGTGGC
TCTTTAACGGTTCCATCCGGGATAATATCCGGTACGGCAAGCTGGACGCTACAGATGAGGAGATCATGGAGGCAGCAAAG
GCGGCGCATGCCCATCATTTTATCCAGACACTTCCGGCTGGATATGACATGGAGCTCAATGAGGAGGCAAGCAACGTTTC
CCAGGGGCAAAAACAGCTTCTGACCATTGCAAGAGCCATTTTGGCAGATCCGAAGATCCTTATTCTGGATGAAGCGACAA
GCTCGGTTGATACAAGAACGGAGATCCAGATTCAGAAGGCAATGGATAATTTGATGAAAGGCAGAACAAGTTTCATTATT
GCCCATCGTCTTTCCACCATTCGGGATGCAGACCGGATTCTGGTTCTCAAAGACGGAGACATCGTTGAGCAGGGCAGGCA
TGAAGAACTCCTTGCAAAAGGTGGATTTTACGCTGATCTCTACAATTCACAGTTTGAAAACGGAAGCAGTAAGGCAGCTT
CCTGA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(43-322)

ABC transporter (ABC_tran)

(386-534)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3E3K037

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

51.119

94.625

0.484