Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   OG696_RS27905 Genome accession   NZ_CP109033
Coordinates   6419696..6421429 (-) Length   577 a.a.
NCBI ID   WP_219572591.1    Uniprot ID   A0ABY9IWG5
Organism   Streptomyces sp. NBC_00656 strain NBC 00656     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 6414696..6426429
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG696_RS27895 (OG696_27895) - 6416554..6417678 (+) 1125 WP_306070007.1 RNA polymerase sigma factor -
  OG696_RS27900 (OG696_27900) rcrQ 6417765..6419696 (-) 1932 WP_219572589.1 ABC transporter ATP-binding protein Regulator
  OG696_RS27905 (OG696_27905) rcrP 6419696..6421429 (-) 1734 WP_219572591.1 ABC transporter ATP-binding protein Regulator
  OG696_RS27910 (OG696_27910) - 6421597..6423042 (-) 1446 WP_405903659.1 FGGY family carbohydrate kinase -
  OG696_RS27915 (OG696_27915) - 6423115..6423414 (-) 300 WP_219572595.1 YtxH domain-containing protein -
  OG696_RS27935 (OG696_27935) - 6424505..6425995 (+) 1491 WP_405903660.1 MFS transporter -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62748.76 Da        Isoelectric Point: 5.2562

>NTDB_id=669843 OG696_RS27905 WP_219572591.1 6419696..6421429(-) (rcrP) [Streptomyces sp. NBC_00656 strain NBC 00656]
MLIKLLRAYLRPYKKPIALLVVFQLLQTCATLYLPTLNADIIDNGVVQGDTGYIVQYGGVMIVVSIAQVVCNIGAVYIGA
RTASALGRDVRASVFDRVQSFSARELGRFGAPSLITRTTNDVQQVQMLALMTFTLMVSAPIMCVGGIIMALGQDVPLSAV
LLAVVPVLGVAVSLIVRKMRPLFRTMQERLDTVNRVLREQITGNRVIRAFVRDGYEEERFRGANTELTDVALSTGRLMAL
MFPTVMTVVNVSSIAVVWFGAHRIDSGGMEIGALTAFLSYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLETESSVVP
PVNPVRELTVQGHLEVRGADFRYPGAEEPVLRSVDLVARAGETTAIIGSTGSGKSTLLGLVPRLFDVTDGQVLVDGTDVR
TLDPVLLAKTVSLVPQKPYLFSGTVATNLRYGNPDATDEELWHALETAQAKEFVEALEHGLDAPIAQGGTNVSGGQRQRL
SIARTLVQRPEIYLFDDSFSALDYATDAALRAALLRETRGATVVIVAQRVSTIRDADRILVLDEGRVVGSGSHHELMDGN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=669843 OG696_RS27905 WP_219572591.1 6419696..6421429(-) (rcrP) [Streptomyces sp. NBC_00656 strain NBC 00656]
GTGCTCATAAAACTCCTGCGGGCCTATCTCCGCCCGTACAAGAAACCGATCGCGCTGCTGGTCGTCTTCCAGCTGCTGCA
GACCTGCGCCACTCTCTATCTGCCCACCCTCAACGCGGACATCATTGACAACGGTGTCGTGCAGGGGGACACGGGCTACA
TCGTCCAGTACGGCGGCGTCATGATCGTCGTCAGCATCGCCCAGGTGGTCTGCAACATCGGGGCCGTCTACATCGGAGCC
CGCACCGCGTCCGCGCTCGGGCGCGACGTACGGGCCTCGGTCTTCGACCGGGTGCAGTCGTTCTCCGCGCGCGAGCTCGG
CCGGTTCGGCGCTCCCTCGCTGATCACCCGTACGACCAACGACGTGCAGCAGGTCCAGATGCTGGCCCTGATGACGTTCA
CGCTGATGGTGTCGGCGCCGATCATGTGTGTCGGCGGCATCATCATGGCGCTCGGCCAGGACGTCCCGCTGTCCGCGGTG
CTGCTCGCGGTGGTGCCGGTCCTCGGCGTCGCGGTGAGCCTGATCGTGCGGAAGATGCGGCCGCTGTTCCGCACGATGCA
GGAGCGCCTCGACACGGTGAACCGGGTGCTGCGCGAGCAGATCACCGGCAACCGGGTCATCCGCGCGTTCGTGCGGGACG
GCTACGAGGAGGAGCGCTTCCGGGGCGCCAACACCGAGCTGACGGACGTGGCGCTGTCCACGGGCCGGCTGATGGCACTG
ATGTTCCCGACCGTGATGACGGTCGTGAACGTGTCGTCGATCGCCGTCGTCTGGTTCGGTGCGCACCGGATCGACAGCGG
CGGGATGGAGATCGGCGCGCTGACCGCGTTCCTCTCCTATCTGATGCAGATCGTCATGTCGGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCCGAAGTGTGCGCCGAGCGCATCCAGGAGGTCCTGGAGACCGAGTCCTCCGTGGTGCCG
CCAGTGAACCCGGTGCGGGAGCTCACGGTCCAAGGGCATCTGGAGGTACGCGGTGCGGACTTCCGCTACCCCGGTGCCGA
GGAGCCGGTGCTGCGCTCCGTGGACCTGGTGGCGCGGGCCGGCGAGACGACCGCGATCATCGGGTCGACGGGCAGCGGGA
AGTCGACGCTGCTCGGACTCGTACCGCGGCTGTTCGATGTGACGGACGGCCAGGTGCTGGTCGACGGGACGGACGTGCGG
ACGCTGGATCCGGTTCTGCTGGCGAAGACCGTGAGCCTGGTCCCGCAGAAGCCGTACCTGTTCTCCGGGACGGTCGCGAC
GAATCTGCGGTACGGGAACCCGGACGCGACCGACGAGGAGCTGTGGCACGCGCTGGAGACCGCGCAGGCCAAGGAGTTCG
TCGAGGCGCTGGAGCACGGGCTCGACGCACCGATCGCGCAGGGCGGCACCAATGTCTCCGGCGGGCAGCGGCAGCGGCTC
TCGATCGCCCGGACGCTGGTGCAGCGGCCGGAGATCTACCTCTTCGACGACTCCTTCTCGGCGCTGGACTACGCCACGGA
CGCGGCGCTGCGTGCGGCGCTGCTGCGGGAGACGCGGGGGGCGACGGTGGTGATCGTCGCGCAGCGGGTGTCGACCATCC
GTGACGCCGACCGGATCCTGGTGCTGGACGAGGGCCGCGTCGTCGGTTCCGGCAGCCACCACGAACTGATGGACGGCAAT
GAGACATACCGGGAGATCGTTCTCTCCCAGCTGACGGAAGCGGAGGCCGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(352-498)

ABC transporter transmembrane region (ABC_membrane)

(18-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.7

94.107

0.383