Detailed information
Bioinformatically predicted
Overview
| Name | codY | Type | Regulator |
| Locus tag | BASH2_RS10395 | Genome accession | NZ_AP014833 |
| Coordinates | 1825366..1826145 (+) | Length | 259 a.a. |
| NCBI ID | WP_000421288.1 | Uniprot ID | Q81WK7 |
| Organism | Bacillus anthracis strain Shikan-NIID | ||
| Function | repression of comK (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1786544..1860467 | 1825366..1826145 | within | 0 |
Gene organization within MGE regions
Location: 1786544..1860467
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BASH2_RS10205 (BASH2_01934) | rsmB | 1786702..1788036 (+) | 1335 | WP_001249680.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| BASH2_RS10210 (BASH2_01935) | rlmN | 1788041..1789129 (+) | 1089 | WP_000450543.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| BASH2_RS10215 (BASH2_01936) | - | 1789134..1789886 (+) | 753 | WP_000648699.1 | Stp1/IreP family PP2C-type Ser/Thr phosphatase | - |
| BASH2_RS10220 (BASH2_01937) | prkC | 1789895..1791868 (+) | 1974 | WP_000904759.1 | serine/threonine protein kinase PrkC | - |
| BASH2_RS10225 (BASH2_01938) | rsgA | 1792137..1793018 (+) | 882 | WP_001113935.1 | ribosome small subunit-dependent GTPase A | - |
| BASH2_RS10230 (BASH2_01939) | rpe | 1793021..1793665 (+) | 645 | WP_000589966.1 | ribulose-phosphate 3-epimerase | - |
| BASH2_RS10235 (BASH2_01940) | - | 1793765..1794445 (+) | 681 | WP_025388434.1 | thiamine diphosphokinase | - |
| BASH2_RS10240 | spoVM | 1794512..1794592 (+) | 81 | WP_001213599.1 | stage V sporulation protein SpoVM | - |
| BASH2_RS10245 (BASH2_01941) | rpmB | 1794665..1794853 (-) | 189 | WP_000124778.1 | 50S ribosomal protein L28 | - |
| BASH2_RS10250 (BASH2_01942) | - | 1795232..1795594 (+) | 363 | WP_000021109.1 | Asp23/Gls24 family envelope stress response protein | - |
| BASH2_RS10255 (BASH2_01943) | - | 1795617..1797293 (+) | 1677 | WP_000027136.1 | DAK2 domain-containing protein | - |
| BASH2_RS10260 (BASH2_01944) | recG | 1797583..1799631 (+) | 2049 | WP_001006884.1 | ATP-dependent DNA helicase RecG | - |
| BASH2_RS10265 (BASH2_01945) | fapR | 1799720..1800313 (+) | 594 | WP_000747352.1 | transcription factor FapR | - |
| BASH2_RS10270 (BASH2_01946) | plsX | 1800310..1801302 (+) | 993 | WP_000684111.1 | phosphate acyltransferase PlsX | - |
| BASH2_RS10275 (BASH2_01947) | fabD | 1801317..1802261 (+) | 945 | WP_000516958.1 | ACP S-malonyltransferase | - |
| BASH2_RS10280 (BASH2_01948) | fabG | 1802261..1803001 (+) | 741 | WP_000911782.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
| BASH2_RS10285 (BASH2_01949) | acpP | 1803071..1803304 (+) | 234 | WP_000786062.1 | acyl carrier protein | - |
| BASH2_RS10290 (BASH2_01950) | rncS | 1803363..1804100 (+) | 738 | WP_001146873.1 | ribonuclease III | - |
| BASH2_RS10295 (BASH2_01951) | smc | 1804247..1807816 (+) | 3570 | WP_000478985.1 | chromosome segregation protein SMC | - |
| BASH2_RS10300 (BASH2_01952) | ftsY | 1807832..1808821 (+) | 990 | WP_000007650.1 | signal recognition particle-docking protein FtsY | - |
| BASH2_RS10305 (BASH2_01953) | - | 1808954..1809286 (+) | 333 | WP_000891062.1 | putative DNA-binding protein | - |
| BASH2_RS10310 (BASH2_01954) | ffh | 1809299..1810648 (+) | 1350 | WP_000863456.1 | signal recognition particle protein | - |
| BASH2_RS10315 (BASH2_01955) | rpsP | 1810749..1811021 (+) | 273 | WP_000268750.1 | 30S ribosomal protein S16 | - |
| BASH2_RS10320 (BASH2_01956) | - | 1811036..1811263 (+) | 228 | WP_000737398.1 | KH domain-containing protein | - |
| BASH2_RS10325 (BASH2_01957) | rimM | 1811384..1811899 (+) | 516 | WP_000170269.1 | ribosome maturation factor RimM | - |
| BASH2_RS10330 (BASH2_01958) | trmD | 1811899..1812633 (+) | 735 | WP_000686892.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| BASH2_RS10335 (BASH2_01959) | rplS | 1812780..1813124 (+) | 345 | WP_001186516.1 | 50S ribosomal protein L19 | - |
| BASH2_RS10340 (BASH2_01960) | lepB | 1813226..1813777 (+) | 552 | WP_000711857.1 | signal peptidase I | - |
| BASH2_RS10345 (BASH2_01961) | ylqF | 1813798..1814688 (+) | 891 | WP_000236707.1 | ribosome biogenesis GTPase YlqF | - |
| BASH2_RS10350 (BASH2_01962) | rnhB | 1814740..1815513 (+) | 774 | WP_001174712.1 | ribonuclease HII | - |
| BASH2_RS10355 (BASH2_01963) | sucC | 1815707..1816867 (+) | 1161 | WP_001020786.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| BASH2_RS10360 (BASH2_01964) | sucD | 1816888..1817790 (+) | 903 | WP_000115178.1 | succinate--CoA ligase subunit alpha | - |
| BASH2_RS10365 (BASH2_01965) | dprA | 1818112..1818746 (+) | 635 | Protein_1909 | DNA-processing protein DprA | - |
| BASH2_RS10370 (BASH2_01966) | topA | 1818891..1820969 (+) | 2079 | WP_001286969.1 | type I DNA topoisomerase | - |
| BASH2_RS10375 (BASH2_01967) | trmFO | 1821020..1822324 (+) | 1305 | WP_003161605.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| BASH2_RS10380 (BASH2_01968) | xerC | 1822390..1823289 (+) | 900 | WP_001101226.1 | tyrosine recombinase XerC | - |
| BASH2_RS10385 (BASH2_01969) | hslV | 1823332..1823874 (+) | 543 | WP_000526272.1 | ATP-dependent protease proteolytic subunit HslV | - |
| BASH2_RS10390 (BASH2_01970) | hslU | 1823897..1825288 (+) | 1392 | WP_000550088.1 | ATP-dependent protease ATPase subunit HslU | - |
| BASH2_RS10395 (BASH2_01971) | codY | 1825366..1826145 (+) | 780 | WP_000421288.1 | GTP-sensing pleiotropic transcriptional regulator CodY | Regulator |
| BASH2_RS10400 (BASH2_01972) | rpsB | 1826495..1827196 (+) | 702 | WP_000111483.1 | 30S ribosomal protein S2 | - |
| BASH2_RS10405 (BASH2_01973) | tsf | 1827300..1828187 (+) | 888 | WP_001018581.1 | translation elongation factor Ts | - |
| BASH2_RS10410 (BASH2_01974) | pyrH | 1828254..1828976 (+) | 723 | WP_000042663.1 | UMP kinase | - |
| BASH2_RS10415 (BASH2_01975) | frr | 1828979..1829536 (+) | 558 | WP_000531498.1 | ribosome recycling factor | - |
| BASH2_RS10420 (BASH2_01976) | uppS | 1829622..1830398 (+) | 777 | WP_000971303.1 | isoprenyl transferase | - |
| BASH2_RS10425 (BASH2_01977) | cdsA | 1830416..1831207 (+) | 792 | WP_000813581.1 | phosphatidate cytidylyltransferase | - |
| BASH2_RS10430 (BASH2_01978) | dxr | 1831231..1832373 (+) | 1143 | WP_000790359.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| BASH2_RS10435 (BASH2_01979) | rseP | 1832390..1833646 (+) | 1257 | WP_001090228.1 | RIP metalloprotease RseP | - |
| BASH2_RS10440 (BASH2_01980) | - | 1833756..1835456 (+) | 1701 | WP_000814312.1 | proline--tRNA ligase | - |
| BASH2_RS10450 (BASH2_01982) | - | 1835581..1839882 (+) | 4302 | WP_000059985.1 | PolC-type DNA polymerase III | - |
| BASH2_RS10455 (BASH2_01983) | rimP | 1840215..1840685 (+) | 471 | WP_000359097.1 | ribosome maturation factor RimP | - |
| BASH2_RS10460 (BASH2_01984) | nusA | 1840703..1841809 (+) | 1107 | WP_000102609.1 | transcription termination factor NusA | - |
| BASH2_RS10465 (BASH2_01985) | rnpM | 1841821..1842093 (+) | 273 | WP_000071128.1 | RNase P modulator RnpM | - |
| BASH2_RS10470 (BASH2_01986) | - | 1842094..1842405 (+) | 312 | WP_001286523.1 | YlxQ family RNA-binding protein | - |
| BASH2_RS10475 (BASH2_01987) | infB | 1842410..1844470 (+) | 2061 | WP_000036339.1 | translation initiation factor IF-2 | - |
| BASH2_RS10480 (BASH2_01988) | - | 1844467..1844748 (+) | 282 | WP_000582364.1 | DUF503 domain-containing protein | - |
| BASH2_RS10485 (BASH2_01989) | rbfA | 1844764..1845120 (+) | 357 | WP_000776446.1 | 30S ribosome-binding factor RbfA | - |
| BASH2_RS10490 (BASH2_01990) | truB | 1845207..1846130 (+) | 924 | WP_000399357.1 | tRNA pseudouridine(55) synthase TruB | - |
| BASH2_RS10495 (BASH2_01991) | ribF | 1846174..1847145 (+) | 972 | WP_000766711.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| BASH2_RS10500 | rpsO | 1847246..1847515 (+) | 270 | WP_001229392.1 | 30S ribosomal protein S15 | - |
| BASH2_RS10505 (BASH2_01992) | pnp | 1847676..1849814 (+) | 2139 | WP_000076733.1 | polyribonucleotide nucleotidyltransferase | - |
| BASH2_RS10510 (BASH2_01993) | - | 1849966..1850865 (+) | 900 | WP_000647529.1 | polysaccharide deacetylase family protein | - |
| BASH2_RS10515 (BASH2_01994) | - | 1850952..1852193 (+) | 1242 | WP_000592993.1 | M16 family metallopeptidase | - |
| BASH2_RS10520 (BASH2_01995) | - | 1852320..1852571 (+) | 252 | WP_001239752.1 | YlmC/YmxH family sporulation protein | - |
| BASH2_RS10530 (BASH2_01996) | dpaA | 1852846..1853748 (+) | 903 | WP_000954726.1 | dipicolinic acid synthetase subunit A | - |
| BASH2_RS10535 (BASH2_01997) | dpaB | 1853745..1854344 (+) | 600 | WP_001049484.1 | dipicolinate synthase subunit B | - |
| BASH2_RS10540 (BASH2_01998) | asd | 1854495..1855541 (+) | 1047 | WP_000414849.1 | aspartate-semialdehyde dehydrogenase | - |
| BASH2_RS10545 (BASH2_01999) | dapG | 1855565..1856797 (+) | 1233 | WP_000692470.1 | aspartate kinase | - |
| BASH2_RS10550 (BASH2_02000) | dapA | 1856809..1857687 (+) | 879 | WP_000564761.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| BASH2_RS10560 (BASH2_02001) | - | 1858453..1860123 (+) | 1671 | WP_000823085.1 | ribonuclease J | - |
Sequence
Protein
Download Length: 259 a.a. Molecular weight: 28774.05 Da Isoelectric Point: 4.7947
>NTDB_id=66982 BASH2_RS10395 WP_000421288.1 1825366..1826145(+) (codY) [Bacillus anthracis strain Shikan-NIID]
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
Nucleotide
Download Length: 780 bp
>NTDB_id=66982 BASH2_RS10395 WP_000421288.1 1825366..1826145(+) (codY) [Bacillus anthracis strain Shikan-NIID]
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| codY | Bacillus subtilis subsp. subtilis str. 168 |
81.081 |
100 |
0.811 |
| codY | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.667 |
98.456 |
0.459 |