Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   MTP37_RS07615 Genome accession   NZ_CP094473
Coordinates   1585880..1587691 (+) Length   603 a.a.
NCBI ID   WP_249236737.1    Uniprot ID   -
Organism   Faecalibacterium wellingii strain HTF-F     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1580880..1592691
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTP37_RS07600 (MTP37_07600) - 1581874..1582869 (-) 996 WP_249236734.1 Na/Pi cotransporter family protein -
  MTP37_RS07605 (MTP37_07605) - 1583069..1583575 (+) 507 WP_249236735.1 MarR family winged helix-turn-helix transcriptional regulator -
  MTP37_RS07610 (MTP37_07610) - 1583572..1585878 (+) 2307 WP_249236736.1 ABC transporter ATP-binding protein -
  MTP37_RS07615 (MTP37_07615) rcrQ 1585880..1587691 (+) 1812 WP_249236737.1 ABC transporter ATP-binding protein Regulator
  MTP37_RS07620 (MTP37_07620) - 1587895..1588821 (-) 927 WP_249236738.1 LysR family transcriptional regulator -
  MTP37_RS07625 (MTP37_07625) - 1588994..1591024 (+) 2031 WP_249236739.1 FAD-binding protein -
  MTP37_RS07630 (MTP37_07630) - 1591226..1592146 (+) 921 WP_249236740.1 AAA family ATPase -

Sequence

Protein


Download         Length: 603 a.a.        Molecular weight: 66864.22 Da        Isoelectric Point: 6.4097

>NTDB_id=669770 MTP37_RS07615 WP_249236737.1 1585880..1587691(+) (rcrQ) [Faecalibacterium wellingii strain HTF-F]
MPRPGRMTTERAKDFKGTLLQLVRTLGRYRLSLVTAIVFAILSTIFNIAGPKVLAKATTALATGWIAKLRGTGSIDFVYI
GRILLFLLGMYLLSSAFSFIQGWLMTGLSQKVCYDFRRQISEKINRLPLAYFEKRTVGEVLSRITNDVDTLGQSLNQSIT
QLITSVTTMIGVLVMMLSISPKMTLIALLILPVSLVLVLIVVRFSQKYFKSQQAILGVVNGQVEEVYSGHNVVKAFNREA
VVLNDFNAANDKLYESAWKSQFLSGLMMPIMNFVGNLGYVAVAIVGSIFAANGIITIGDIQAFIQYVKNFTQPIQQLSQV
SNMLQSMAAAAERVFEFLNEPEEDQQADPARRADPACIDGQVTFSHVRFGYTPDKTVIHDFSCEVKPGQKVAIVGPTGAG
KTTMVKLLMRFYDVDSGSITLNGHDVRDFDRSALREGFGMVLQDTWLFKGTIMENIRYGRLDATDEEVIAAAKAANADHF
IRTLPGGYQMELNEDASNVSQGQKQLLTIARTILADNRILILDEATSSVDTRTEQRIQTAMDRLMEGRTSFVIAHRLSTI
RDADLILVMRDGDIVEQGTHDQLIEAGGFYADLYNSQFEDVVE

Nucleotide


Download         Length: 1812 bp        

>NTDB_id=669770 MTP37_RS07615 WP_249236737.1 1585880..1587691(+) (rcrQ) [Faecalibacterium wellingii strain HTF-F]
ATGCCAAGACCCGGACGCATGACGACCGAACGCGCCAAGGACTTCAAGGGCACCCTGCTGCAGCTTGTGCGCACCCTTGG
CCGCTACCGCCTTTCGCTCGTTACCGCCATTGTATTTGCCATTCTTTCTACCATCTTCAACATCGCAGGCCCCAAGGTGC
TGGCAAAAGCCACCACGGCCCTTGCCACCGGCTGGATCGCCAAGCTGCGCGGCACCGGCAGCATCGACTTTGTGTATATC
GGCCGCATCCTGCTGTTCTTGCTGGGCATGTACCTGCTGAGCAGCGCATTCAGCTTTATTCAGGGCTGGCTGATGACCGG
TCTTTCGCAGAAGGTGTGCTACGACTTCCGCCGTCAGATCAGCGAAAAGATCAACCGCCTGCCCCTTGCCTATTTTGAAA
AGCGCACCGTGGGCGAGGTGCTGTCCCGCATCACCAACGATGTGGACACGCTGGGCCAGAGCCTGAACCAGAGCATCACC
CAGCTCATCACCAGCGTGACCACCATGATCGGCGTGCTGGTCATGATGCTATCCATCAGCCCGAAGATGACCCTGATTGC
CCTGCTGATCCTGCCCGTCTCGCTGGTGCTCGTGCTCATCGTAGTTCGGTTCAGCCAGAAATACTTCAAGTCCCAGCAGG
CCATTCTGGGCGTCGTAAACGGTCAGGTGGAAGAAGTCTACTCCGGCCACAACGTGGTCAAAGCCTTCAACCGCGAAGCC
GTGGTGCTGAATGACTTCAACGCCGCCAACGACAAGCTGTATGAATCTGCGTGGAAAAGCCAGTTCCTCTCCGGCCTGAT
GATGCCCATTATGAACTTTGTGGGCAATCTGGGCTATGTGGCGGTGGCCATCGTGGGCAGCATTTTTGCGGCAAACGGCA
TCATTACCATCGGCGACATTCAGGCCTTCATCCAGTACGTCAAGAACTTCACCCAGCCCATCCAGCAGCTTTCTCAGGTG
TCCAACATGCTGCAGAGCATGGCCGCTGCCGCTGAGCGGGTGTTCGAGTTTCTGAACGAGCCGGAAGAGGACCAGCAGGC
AGACCCGGCCCGCCGCGCGGACCCTGCCTGTATCGACGGACAGGTGACATTCAGCCATGTCCGCTTCGGCTACACCCCGG
ACAAGACCGTCATCCACGATTTCAGCTGTGAGGTCAAGCCCGGCCAGAAGGTGGCCATCGTCGGCCCCACCGGCGCAGGC
AAGACCACCATGGTCAAGCTGCTCATGCGCTTCTATGATGTAGATTCCGGTTCCATCACCCTGAATGGCCACGATGTGCG
GGACTTTGACCGCAGCGCCCTGCGTGAGGGCTTCGGCATGGTGCTGCAGGACACATGGCTGTTCAAGGGCACCATCATGG
AGAACATCCGCTATGGCCGACTGGATGCCACCGATGAAGAAGTGATCGCCGCCGCCAAGGCTGCCAACGCCGACCACTTT
ATCCGCACCCTGCCCGGCGGCTACCAGATGGAGCTGAACGAGGATGCTTCCAACGTAAGTCAGGGCCAGAAGCAGCTGCT
CACCATCGCCCGCACCATTCTGGCCGACAACCGCATCCTGATTTTGGACGAGGCCACCAGCAGTGTGGATACCCGCACCG
AGCAGCGCATCCAGACCGCCATGGACCGCCTGATGGAGGGCCGCACCAGCTTTGTGATCGCCCACCGTCTTTCCACCATC
CGGGACGCCGACCTCATCCTTGTGATGCGAGATGGCGACATTGTGGAGCAGGGCACCCACGACCAGCTGATCGAAGCTGG
CGGCTTCTACGCCGATCTGTACAACAGCCAGTTCGAGGACGTGGTGGAGTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(34-313)

ABC transporter (ABC_tran)

(379-527)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

50.937

97.347

0.496