Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   MTP43_RS08870 Genome accession   NZ_CP094472
Coordinates   1890834..1892645 (+) Length   603 a.a.
NCBI ID   WP_015537848.1    Uniprot ID   A0A3E2UUZ5
Organism   Faecalibacterium sp. IP-1-18     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1885834..1897645
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTP43_RS08850 (MTP43_08850) - 1886121..1886777 (-) 657 WP_112090304.1 sortase -
  MTP43_RS08855 (MTP43_08855) - 1886839..1887837 (-) 999 WP_249234753.1 Na/Pi symporter -
  MTP43_RS08860 (MTP43_08860) - 1888042..1888551 (+) 510 WP_249234754.1 MarR family transcriptional regulator -
  MTP43_RS08865 (MTP43_08865) - 1888535..1890832 (+) 2298 WP_249234755.1 ABC transporter ATP-binding protein -
  MTP43_RS08870 (MTP43_08870) rcrQ 1890834..1892645 (+) 1812 WP_015537848.1 ABC transporter ATP-binding protein Regulator
  MTP43_RS08875 (MTP43_08875) - 1892814..1893740 (-) 927 WP_015537847.1 LysR family transcriptional regulator -
  MTP43_RS08880 (MTP43_08880) - 1893914..1895947 (+) 2034 WP_015537846.1 FAD-binding protein -
  MTP43_RS08885 (MTP43_08885) - 1896150..1897070 (+) 921 WP_249234756.1 MoxR family ATPase -

Sequence

Protein


Download         Length: 603 a.a.        Molecular weight: 66712.00 Da        Isoelectric Point: 6.7074

>NTDB_id=669762 MTP43_RS08870 WP_015537848.1 1890834..1892645(+) (rcrQ) [Faecalibacterium sp. IP-1-18]
MPRPGRPTTERAKNFKGTLRQLIRTMSHYKLPLAAAMLFAVLSTIFNIAGPKVLAKATTALATGWIARLRGTGSIDFVYI
GRILLFLLGMYLLSSAFSFIQGWLMTGLSQKVCYDFRRQISEKINRLPLAYFEKRTVGEVLSRITNDVDTLGQSLNQSIT
QLITSVTTMIGVLVMMFSISPRMTLIALLILPVSLALVLVVVKFSQKYFKAQQATLGVVNGQVEEIYAGHNVVKAFNREA
VVLADFNAANDKLYESAWKSQFLSGLMMPIMNFVGNLGYVAVAIVGSIFAANGVITIGDIQAFIQYVKNFTQPIQQLSQV
SNMLQSMAAAAERVFEFLNEPEEAQLADPARRADPADIDGQVTFDHVRFGYTPDKTVIHDFSCTVQPGQKVAIVGPTGAG
KTTMVKLLMRFYDVDAGSITLNGHNVRDFDRSALREGFGMVLQDTWLFKGTIMENIRYGRLDATDEEVIAAAKAANADHF
IRTLPGGYQMELNEDASNVSQGQKQLLTIARTILADNRILILDEATSSVDTRTEQRIQTAMDRLMEGRTSFVIAHRLSTI
RDADLILVMRDGDIVEQGTHDQLIEAGGFYADLYNSQFEDVVD

Nucleotide


Download         Length: 1812 bp        

>NTDB_id=669762 MTP43_RS08870 WP_015537848.1 1890834..1892645(+) (rcrQ) [Faecalibacterium sp. IP-1-18]
ATGCCCAGACCCGGACGTCCCACCACTGAGCGCGCCAAGAACTTTAAAGGCACGCTGCGGCAGCTCATCCGCACTATGAG
CCACTACAAGCTGCCCCTTGCGGCAGCCATGCTGTTTGCTGTTCTGTCCACCATCTTCAACATTGCAGGCCCCAAGGTGC
TGGCAAAAGCCACCACCGCCCTTGCCACCGGCTGGATCGCCCGGCTGCGCGGCACCGGCAGCATCGATTTTGTGTATATC
GGCCGCATTCTGCTGTTTTTGCTGGGAATGTACCTGCTGAGCAGCGCCTTCAGCTTTATTCAGGGCTGGCTGATGACCGG
CCTTTCCCAGAAGGTCTGCTACGACTTCCGCCGCCAGATCAGTGAAAAGATCAACCGCCTGCCGCTGGCGTACTTTGAAA
AGCGCACCGTGGGCGAGGTGCTCTCCCGCATCACCAACGATGTGGACACACTGGGCCAGAGCTTGAACCAGAGCATCACC
CAGCTGATCACCAGCGTGACCACCATGATCGGTGTGCTGGTGATGATGTTTTCCATCAGCCCCCGCATGACCCTGATTGC
CCTGCTGATCTTACCGGTATCGCTGGCGCTGGTGCTGGTGGTGGTCAAGTTCAGCCAGAAGTACTTCAAGGCACAGCAGG
CTACGCTGGGCGTGGTCAACGGTCAGGTCGAGGAGATCTACGCCGGCCACAATGTGGTCAAGGCGTTTAACCGCGAAGCC
GTGGTACTGGCAGACTTCAACGCCGCCAACGATAAGCTGTACGAATCCGCATGGAAAAGCCAGTTCCTCTCCGGTCTGAT
GATGCCCATCATGAACTTTGTGGGCAACTTGGGCTATGTGGCAGTGGCCATCGTGGGCAGCATTTTTGCTGCAAACGGTG
TTATCACCATTGGTGATATTCAGGCTTTTATCCAGTATGTCAAAAACTTTACCCAGCCCATCCAGCAGCTTTCGCAGGTG
TCCAATATGCTGCAAAGCATGGCTGCTGCTGCCGAGCGCGTGTTCGAGTTTTTGAACGAGCCGGAGGAGGCGCAGTTGGC
CGACCCTGCCCGCCGCGCCGACCCCGCCGACATTGACGGACAGGTCACCTTTGACCATGTGCGCTTCGGCTACACCCCGG
ACAAGACCGTCATCCACGACTTCAGCTGCACGGTGCAGCCCGGCCAGAAGGTAGCCATCGTAGGCCCCACCGGTGCGGGC
AAGACCACCATGGTCAAGCTGCTGATGCGCTTTTACGATGTGGACGCCGGTTCTATCACCCTGAACGGCCACAATGTGCG
GGACTTTGACCGCAGCGCCTTGCGCGAAGGCTTTGGCATGGTGCTGCAGGACACATGGCTGTTTAAGGGCACCATCATGG
AGAACATCCGCTACGGCCGGCTGGACGCCACCGATGAAGAGGTGATTGCTGCCGCAAAGGCTGCCAACGCCGACCACTTT
ATCCGCACCCTGCCCGGCGGCTACCAGATGGAGCTGAACGAGGACGCCTCCAACGTCAGTCAGGGACAAAAGCAGCTGCT
CACCATCGCCCGCACCATTCTGGCAGATAACCGCATCCTGATTTTGGACGAGGCTACCAGCAGCGTGGATACCCGCACCG
AGCAGCGCATCCAGACCGCCATGGACCGCCTAATGGAGGGGCGCACCAGCTTTGTCATCGCCCACCGCCTTTCCACCATC
CGGGATGCCGACCTCATCCTTGTGATGCGGGACGGCGACATTGTGGAGCAGGGCACCCACGACCAGCTGATCGAGGCAGG
CGGCTTCTACGCTGACCTGTACAACAGCCAGTTTGAGGACGTGGTGGATTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(34-313)

ABC transporter (ABC_tran)

(379-527)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3E2UUZ5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

50.68

97.512

0.494